RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GNB2P62879 340 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 FOLH1Q04609 750 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 SLC17A1Q14916 467 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 SLMAPQ14BN4 828 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 PAN3Q58A45 887 aaKnown RBP2.37□□□□□ -2.03
GCFC2-209ENST00000486016 CASC4Q6P4E1 433 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 LINC00696Q6ZRV3 163 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 PHLDB2Q86SQ0 1253 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 IQCA1Q86XH1 822 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 CREBRFQ8IUR6 639 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 ENTHD1Q8IYW4 607 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 Q8N9L7 120 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 NFAM1Q8NET5 270 aaPredicted RBP2.37□□□□□ -2.03
GCFC2-209ENST00000486016 SGF29Q96ES7 293 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 RBM18Q96H35 190 aaKnown RBP2.37□□□□□ -2.03
GCFC2-209ENST00000486016 UTP14AQ9BVJ6 771 aaKnown RBP2.37□□□□□ -2.03
GCFC2-209ENST00000486016 C2orf40Q9H1Z8 148 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 TMEM206Q9H813 350 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 TUFT1Q9NNX1 390 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 ABCC13Q9NSE7 274 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 VPS18Q9P253 973 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 LIPT1Q9Y234 373 aa2.37□□□□□ -2.03
GCFC2-209ENST00000486016 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 FAM231BA6NCW3 169 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 ANKDD1BA6NHY2 528 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 KBTBD13C9JR72 458 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 ASNSP08243 561 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 CCND3P30281 292 aaPredicted RBP2.36□□□□□ -2.03
GCFC2-209ENST00000486016 PRKAR2BP31323 418 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 MAGEA9P43362 315 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 CCDC158Q5M9N0 1113 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 PODNL1Q6PEZ8 512 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 ABRAXAS1Q6UWZ7 409 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 TUSC5Q8IXB3 177 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 CCDC170Q8IYT3 715 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 SYCP3Q8IZU3 236 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 NUP93Q8N1F7 819 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 OR2L5Q8NG80 312 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 OR7G3Q8NG95 312 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 VN1R17PQ8TDU5 208 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 AFAP1L1Q8TED9 768 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 ELSPBP1Q96BH3 223 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 ERGIC2Q96RQ1 377 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 FUT8Q9BYC5 575 aa2.36□□□□□ -2.03
GCFC2-209ENST00000486016 LSG1Q9H089 658 aaKnown RBP2.36□□□□□ -2.03
GCFC2-209ENST00000486016 MTIF3Q9H2K0 278 aaKnown RBP2.36□□□□□ -2.03
GCFC2-209ENST00000486016 MMADHCQ9H3L0 296 aaPredicted RBP2.36□□□□□ -2.03
GCFC2-209ENST00000486016 MTF2Q9Y483 593 aaPredicted RBP2.36□□□□□ -2.03
GCFC2-209ENST00000486016 IGKV6-21A0A0C4DH24 114 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 SDR42E2A6NKP2 422 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 RNF212BA8MTL3 300 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 TMCO5BA8MYB1 307 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 SLC33A1O00400 549 aaPredicted RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 CTDSPLO15194 276 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 FMO6PO60774 539 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 NME6O75414 186 aaPredicted RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 CSDE1O75534 798 aaKnown RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 DUSP14O95147 198 aaKnown RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 SLC16A8O95907 504 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 IGLV1-47P01700 117 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 FCGR3AP08637 254 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 P4HA1P13674 534 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 COPB2P35606 906 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 FRKP42685 505 aaPredicted RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 NPBWR1P48145 328 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 CETN1Q12798 172 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF674Q2M3X9 581 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 IQCCQ4KMZ1 466 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 IYDQ6PHW0 289 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 C2orf66Q6UXQ4 117 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF730Q6ZMV8 503 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 TMCO5AQ8N6Q1 288 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 OR1K1Q8NGR3 316 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 GANCQ8TET4 914 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 PTP4A1Q93096 173 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 TEKT1Q969V4 418 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF184Q99676 751 aaPredicted RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ATG101Q9BSB4 218 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF350Q9GZX5 532 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 SRD5A3Q9H8P0 318 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 ABCB8Q9NUT2 735 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 DNAJC17Q9NVM6 304 aaKnown RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 IMPAD1Q9NX62 359 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 SLCO1C1Q9NYB5 712 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 CNIH4Q9P003 139 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 LEF1Q9UJU2 399 aaPredicted RBP2.35□□□□□ -2.03
GCFC2-209ENST00000486016 GMEB2Q9UKD1 530 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 GPR132Q9UNW8 380 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 CA5BQ9Y2D0 317 aa2.35□□□□□ -2.03
GCFC2-209ENST00000486016 IGHV3OR16-12A0A075B7B8 117 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 ILVBLA1L0T0 632 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 GTPBP10A4D1E9 387 aaKnown RBP2.34□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF263O14978 683 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 GPAA1O43292 621 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 GJB5O95377 273 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 GH1P01241 217 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 RPL27P61353 136 aaKnown RBP2.34□□□□□ -2.03
GCFC2-209ENST00000486016 ST8SIA6P61647 398 aa2.34□□□□□ -2.03
GCFC2-209ENST00000486016 ASIC1P78348 528 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms