RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RBM18Q96H35 190 aaKnown RBP10.93□□□□□ -0.66
HPS4-212ENST00000481910 CCT8L2Q96SF2 557 aa10.93□□□□□ -0.66
HPS4-212ENST00000481910 IFT80Q9P2H3 777 aaPredicted RBP10.93□□□□□ -0.66
HPS4-212ENST00000481910 TRPC4Q9UBN4 977 aa10.93□□□□□ -0.66
HPS4-212ENST00000481910 BAIAP2L1Q9UHR4 511 aa10.93□□□□□ -0.66
HPS4-212ENST00000481910 DLGAP4Q9Y2H0 992 aa10.93□□□□□ -0.66
HPS4-212ENST00000481910 UBDO15205 165 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 PRKACAP17612 351 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CD82P27701 267 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 DIO3P55073 304 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 S100A12P80511 92 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 ZNF763Q0D2J5 394 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TMEM198Q66K66 360 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 MRM1Q6IN84 353 aaKnown RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 LCN10Q6JVE6 187 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 SPATA19Q7Z5L4 167 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 NLGN4XQ8N0W4 816 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CA13Q8N1Q1 262 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 LIX1Q8N485 282 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 NLGN4YQ8NFZ3 816 aaPredicted RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 PEX11GQ96HA9 241 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 MAPKAP1Q9BPZ7 522 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CHST8Q9H2A9 424 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 LYRM4Q9HD34 91 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 SLC22A11Q9NSA0 550 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 LYARQ9NX58 379 aaKnown RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 MS4A12Q9NXJ0 267 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 KCMF1Q9P0J7 381 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 KIF17Q9P2E2 1029 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 ZNF282Q9UDV7 671 aaPredicted RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 ASB4Q9Y574 426 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 SPACA6W5XKT8 324 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 PSMD12O00232 456 aaPredicted RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 SNX3O60493 162 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 FAM107AO95990 144 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 G6PDP11413 515 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 PRPS2P11908 318 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 BCKDHAP12694 445 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 RNH1P13489 461 aaKnown RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 ACPPP15309 386 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CD46P15529 392 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 SDC1P18827 310 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 ATP6V1C1P21283 382 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CPN2P22792 545 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TACR1P25103 407 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 XCR1P46094 333 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TAS2R50P59544 299 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 POLR2GP62487 172 aaKnown RBP eCLIP10.92□□□□□ -0.66
HPS4-212ENST00000481910 TRA2BP62995 288 aaKnown RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 SHC2P98077 582 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 OCA2Q04671 838 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 FAPQ12884 760 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 MLIPQ5VWP3 458 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 C16orf54Q6UWD8 224 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 ZNF517Q6ZMY9 492 aaPredicted RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 ZNF704Q6ZNC4 412 aaPredicted RBP10.92□□□□□ -0.66
HPS4-212ENST00000481910 SHISA5Q8N114 240 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TMEM132CQ8N3T6 1108 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 SLC22A8Q8TCC7 542 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 C16orf78Q8WTQ4 265 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 STON2Q8WXE9 905 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TM4SF18Q96CE8 201 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 FCRL1Q96LA6 429 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 TSSK3Q96PN8 268 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 PHF11Q9UIL8 331 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 ATG4BQ9Y4P1 393 aa10.92□□□□□ -0.66
HPS4-212ENST00000481910 CCDC88CQ9P219 2028 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 CROCCQ5TZA2 2017 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 A0A1W2PR48 441 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 FAM227AF5H4B4 570 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 PROM1O43490 865 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 ONECUT2O95948 504 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 ALDOCP09972 364 aaKnown RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 ACADSP16219 412 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 TLX1P31314 330 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 BUD31P41223 144 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 RAB38P57729 211 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 ERV3-1Q14264 604 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 RPS6KA2Q15349 733 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 VWA2Q5GFL6 755 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 C18orf63Q68DL7 685 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 FAM122CQ6P4D5 195 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 COX15Q7KZN9 410 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 OVCH1Q7RTY7 1134 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 PIGWQ7Z7B1 504 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 FAM47BQ8NA70 645 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 CLHC1Q8NHS4 586 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 C10orf82Q8WW14 230 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 MARK4Q96L34 752 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 ZNF578Q96N58 590 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 RBCK1Q9BYM8 510 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 MKKSQ9NPJ1 570 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 TEX10Q9NXF1 929 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 ASIC5Q9NY37 505 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 GPN3Q9UHW5 284 aaPredicted RBP10.91□□□□□ -0.66
HPS4-212ENST00000481910 TRIM33Q9UPN9 1127 aa10.91□□□□□ -0.66
HPS4-212ENST00000481910 AHCTF1Q8WYP5 2266 aa10.9□□□□□ -0.66
HPS4-212ENST00000481910 C9J4A7 227 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms