RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 CRLF3Q8IUI8 442 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 DDIASQ8IXT1 998 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 CLYBLQ8N0X4 340 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 Q8NA96 180 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 CATSPER1Q8NEC5 780 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 NCLNQ969V3 563 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 VPS50Q96JG6 964 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 FCRL1Q96LA6 429 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 EPN3Q9H201 632 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 KCNK13Q9HB14 408 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 LRTM1Q9HBL6 345 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 EML4Q9HC35 981 aaKnown RBP9.86□□□□□ -0.83
SSBP1-210ENST00000481508 MMP25Q9NPA2 562 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 PNPOQ9NVS9 261 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 MS4A12Q9NXJ0 267 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 AHSPQ9NZD4 102 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 PPIEQ9UNP9 301 aaKnown RBP9.86□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF451Q9Y4E5 1061 aa9.86□□□□□ -0.83
SSBP1-210ENST00000481508 NAV3Q8IVL0 2385 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 TRBV11-1A0A0K0K1C0 115 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ATP6AP2A0A1C7CYW4 349 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 TMEM200CA6NKL6 621 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 A8MUI8 341 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 C17orf105B2RV13 164 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 NPIPB8E9PQR5 432 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 SLC28A1O00337 649 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ATP6AP2O75787 350 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 GPR75O95800 540 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 CLPSP04118 112 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 SFTPCP11686 197 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ALOX15P16050 662 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ALDH9A1P49189 494 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 RIPPLY3P57055 190 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 RPL38P63173 70 aaKnown RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 STX3Q13277 289 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 MFAP5Q13361 173 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 NR6A1Q15406 480 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ELAVL1Q15717 326 aaKnown RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 LTB4RQ15722 352 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 PDCD2Q16342 344 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 RFTN2Q52LD8 501 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 PRR30Q53SZ7 412 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 CRB2Q5IJ48 1285 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF468Q5VIY5 522 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 AGAP7PQ5VUJ5 663 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 SLC6A19Q695T7 634 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 H3F3CQ6NXT2 135 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 SLC48A1Q6P1K1 146 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ISLR2Q6UXK2 745 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 BEST3Q8N1M1 668 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 SIMC1Q8NDZ2 872 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 B3GNT7Q8NFL0 401 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 CDC26Q8NHZ8 85 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.85□□□□□ -0.837e-10■■□□□ 14.1
SSBP1-210ENST00000481508 SLC2A12Q8TD20 617 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF721Q8TF20 911 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 TANKQ92844 425 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 EGLN2Q96KS0 407 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 PPP1R36Q96LQ0 422 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 AGAP4Q96P64 663 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 LIN28AQ9H9Z2 209 aaKnown RBP9.85□□□□□ -0.83
SSBP1-210ENST00000481508 NMRK1Q9NWW6 199 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 HAO1Q9UJM8 370 aa9.85□□□□□ -0.83
SSBP1-210ENST00000481508 MED13LQ71F56 2210 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 PDZD2O15018 2839 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 GNG14A0A1W2PPG7 69 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 RGS14O43566 566 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF354AO60765 605 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 SNNO75324 88 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 SEC22BO75396 215 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 WDPCPO95876 746 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 ANXA4P09525 319 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 SDC1P18827 310 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 TLX1P31314 330 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 FEN1P39748 380 aaKnown RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 HK2P52789 917 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 TRA2BP62995 288 aaKnown RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF763Q0D2J5 394 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 DUSP8Q13202 625 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 SERTAD2Q14140 314 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 TERF2Q15554 542 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 PLEKHN1Q494U1 663 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 GALNTL6Q49A17 601 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 FAM71E1Q6IPT2 247 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 ANKRD26P1Q6NSI1 321 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 NOXRED1Q6NXP6 359 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 IGFL3Q6UXB1 125 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 OR4K14Q8NGD5 310 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 CLHC1Q8NHS4 586 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 THAP3Q8WTV1 239 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 NUDT8Q8WV74 236 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 CNRIP1Q96F85 164 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-210ENST00000481508 ZNF681Q96N22 645 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 DGAT2Q96PD7 388 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 C1orf50Q9BV19 199 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 OR8D2Q9GZM6 311 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 CDCP1Q9H5V8 836 aa9.84□□□□□ -0.83
SSBP1-210ENST00000481508 WDR41Q9HAD4 459 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms