RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 XKP51811 444 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 MVDP53602 400 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 SCARB2Q14108 478 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 RAET1GQ6H3X3 334 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 TMEM91Q6ZNR0 172 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 LRRC28Q86X40 367 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 PIAS4Q8N2W9 510 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 EIF4E3Q8N5X7 224 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 ARIH2OSQ8N7S6 290 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 ATOH1Q92858 354 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 R3HDMLQ9H3Y0 253 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 EXTL2Q9UBQ6 330 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 RUVBL1Q9Y265 456 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 SMIM35A0A1B0GVV1 85 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 A0A1W2PQH9 124 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 G3V3Q6 166 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 ADAM11O75078 769 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 TCRBP04435 133 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 HLA-DPB1P04440 258 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 IFNW1P05000 195 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 ELK1P19419 428 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 RBMS1P29558 406 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 ASMTP46597 345 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 GAS1P54826 345 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 EEF1A2Q05639 463 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 RAB40BQ12829 278 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 CCDC85BQ15834 202 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 ZNF630Q2M218 657 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 CPTPQ5TA50 214 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 FRG2Q64ET8 278 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 HSD17B13Q7Z5P4 300 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 MIB1Q86YT6 1006 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 ZBTB2Q8N680 514 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 TCEANCQ8N8B7 351 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 OR5M3Q8NGP4 307 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 GOT1L1Q8NHS2 421 aaPredicted RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 FRG2BQ96QU4 278 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 RNF32Q9H0A6 362 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 LATS2Q9NRM7 1088 aa10.13□□□□□ -0.79
SIK3-210ENST00000480468 EXOSC1Q9Y3B2 195 aaKnown RBP10.13□□□□□ -0.79
SIK3-210ENST00000480468 TRAV6A0A075B6T7 132 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 OR6C65A6NJZ3 312 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 SLC28A2O43868 658 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 GMDSO60547 372 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 TRBC1P01850 177 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 OR1E1P30953 314 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 CALCRP30988 508 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 CSTF1Q05048 431 aaKnown RBP10.12□□□□□ -0.79
SIK3-210ENST00000480468 CRYZQ08257 329 aaKnown RBP10.12□□□□□ -0.79
SIK3-210ENST00000480468 C2orf80Q0P641 193 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ARHGEF7Q14155 803 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 OPCMLQ14982 345 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 GSG1Q2KHT4 349 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 SYT14P1Q58G82 188 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 GPRC6AQ5T6X5 926 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 TAPT1Q6NXT6 567 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 SEZ6L2Q6UXD5 910 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 WASH2PQ6VEQ5 465 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 C3P1Q6ZMU1 363 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 USP45Q70EL2 814 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 FTMTQ8N4E7 242 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 OR52N2Q8NGI0 321 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ADAMTS19Q8TE59 1207 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
SIK3-210ENST00000480468 SCRN2Q96FV2 425 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 NPAS1Q99742 590 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ARHGAP9Q9BRR9 750 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 EBPLQ9BY08 206 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ADGRE3Q9BY15 652 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ACTR6Q9GZN1 396 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 RERGLQ9H628 205 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 BRD7Q9NPI1 651 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 ENAMQ9NRM1 1142 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 PFDN2Q9UHV9 154 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 CHD5Q8TDI0 1954 aa10.12□□□□□ -0.79
SIK3-210ENST00000480468 GABRR3A8MPY1 467 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 ANKRD66B4E2M5 251 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 FAAHO00519 579 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 RNASET2O00584 256 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 LANCL1O43813 399 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 NMBP08949 121 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 RPL9P32969 192 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 FEN1P39748 380 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 CRATP43155 626 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 RECQLP46063 649 aaPredicted RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 PCBP3P57721 371 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 GPR85P60893 370 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 GANABQ14697 944 aaKnown RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 XKR6Q5GH73 641 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 KIAA1211LQ6NV74 962 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 FAM198BQ6UWH4 519 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 WDR53Q7Z5U6 358 aaPredicted RBP10.11□□□□□ -0.79
SIK3-210ENST00000480468 LRRTM3Q86VH5 581 aa10.11□□□□□ -0.79
SIK3-210ENST00000480468 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms