RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PTPN7P35236 360 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 RPL22P35268 128 aaKnown RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 MSH2P43246 934 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 EIF1AXP47813 144 aaKnown RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 STARP49675 285 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 LHX2P50458 406 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 HADHBP55084 474 aaKnown RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 LIM2P55344 173 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 STX4Q12846 297 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 SERTAD2Q14140 314 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 EFTUD2Q15029 972 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 IQCB1Q15051 598 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TOMM20Q15388 145 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PDCD2Q16342 344 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 STX1AQ16623 288 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PGGHGQ32M88 737 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TTLL9Q3SXZ7 439 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TOR1AIP1Q5JTV8 583 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PCID2Q5JVF3 399 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 MRNIPQ6NTE8 343 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 SASS6Q6UVJ0 657 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 ENPP6Q6UWR7 440 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PPP1R21Q6ZMI0 780 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 CENPUQ71F23 418 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PIWIL4Q7Z3Z4 852 aaKnown RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 GRAMD2AQ8IUY3 354 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TBC1D19Q8N5T2 526 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 C3orf56Q8N813 242 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 CNEP1R1Q8N9A8 125 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 OR56A3Q8NH54 315 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 SPPL2AQ8TCT8 520 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 NEIL2Q969S2 332 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 FBXW5Q969U6 566 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 MS4A6EQ96DS6 147 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 C11orf24Q96F05 449 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TMEM41AQ96HV5 264 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 HS6ST2Q96MM7 605 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 RUNDC3BQ96NL0 473 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 GRIP2Q9C0E4 1043 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 KLHL4Q9C0H6 718 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TEX10Q9NXF1 929 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 HEY2Q9UBP5 337 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 COPS7AQ9UBW8 275 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 ADAMTS6Q9UKP5 1117 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 RNF112Q9ULX5 631 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 DAPP1Q9UN19 280 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 DHRS7Q9Y394 339 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 TRRAPQ9Y4A5 3859 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 LRIT2A6NDA9 550 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 TP53I11O14683 189 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 B3GALT2O43825 422 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 AKR1B10O60218 316 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 LDB3O75112 727 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 TJP3O95049 919 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 HNRNPH1P31943 449 aaKnown RBP6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CASP3P42574 277 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 MASP1P48740 699 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 GFRA1P56159 465 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CLDN18P56856 261 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 FBXW4P57775 412 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 DSCR9P59020 149 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CRADDP78560 199 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 REEP5Q00765 189 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CTBP1Q13363 440 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CSHL1Q14406 222 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 RPS6KA2Q15349 733 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 DUPD1Q68J44 220 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 OR2A2Q6IF42 318 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 AADACL2Q6P093 401 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF549Q6P9A3 640 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 TMEM64Q6YI46 380 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 DGAT2L6Q6ZPD8 337 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 CILP2Q8IUL8 1156 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 ZFAND2BQ8WV99 257 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 KCNJ9Q92806 393 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 NEUROG1Q92886 237 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 MFSD3Q96ES6 412 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF845Q96IR2 970 aaPredicted RBP6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 FAR2Q96K12 515 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 DOCK7Q96N67 2140 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 ANP32EQ9BTT0 268 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 TRAF4Q9BUZ4 470 aaPredicted RBP6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 PHACTR1Q9C0D0 580 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 C12orf65Q9H3J6 166 aaKnown RBP6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 PARVBQ9HBI1 364 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 ARMCX1Q9P291 453 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 KCNS2Q9ULS6 477 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 DLGAP4Q9Y2H0 992 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 EML6Q6ZMW3 1958 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 NCKAP5O14513 1909 aa6.6□□□□□ -1.35
SPTLC1-205ENST00000477888 FREM1Q5H8C1 2179 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 GNB5O14775 395 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 PFDN6O15212 129 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 ERI3O43414 337 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 TBX6O95947 436 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms