RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 IL21Q9HBE4 155 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 STOML2Q9UJZ1 356 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 KCNK5O95279 499 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 SERPINA3P01011 423 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 LCKP06239 509 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 CA3P07451 260 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ACPPP15309 386 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 RCVRNP35243 200 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 BCAP31P51572 246 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ID2Q02363 134 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 IDNKQ5T6J7 187 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 UTS2BQ765I0 119 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 FGF13Q92913 245 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 Q9N2J8 555 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 C14orf105Q9NVL8 296 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 HRASLS2Q9NWW9 162 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ING4Q9UNL4 249 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 MRPS17Q9Y2R5 130 aaKnown RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TMEM150CB9EJG8 249 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 NUDT7P0C024 238 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 IFI30P13284 250 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 OR2B6P58173 313 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 EMX1Q04741 257 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 HENMT1Q5T8I9 393 aaKnown RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 COMMD2Q86X83 199 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TSTD1Q8NFU3 115 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 OR4K5Q8NGD3 323 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 OR52P1PQ8NH57 321 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 GAL3ST4Q96RP7 486 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 SPATA2Q9UM82 520 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 LATO43561 262 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 SSNA1O43805 119 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 CLEC3AO75596 197 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ADARB1P78563 741 aaKnown RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 SLC30A6Q6NXT4 461 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 DUS1LQ6P1R4 473 aaKnown RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 FZD3Q9NPG1 666 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TRIM36Q9NQ86 728 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 CLEC4AQ9UMR7 237 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ISPDA4D126 451 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 GFYI3L273 518 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 GNB5O14775 395 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 NDUFB5O43674 189 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 NKX3-2P78367 333 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TAP2Q03519 686 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 SLC5A12Q1EHB4 618 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TCEAL5Q5H9L2 206 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 POMZP3Q6PJE2 187 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 FRRS1Q6ZNA5 592 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF433Q8N7K0 673 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-220ENST00000477528 TP53INP1Q96A56 240 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ARRDC3Q96B67 414 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 VMP1Q96GC9 406 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 COQ7Q99807 217 aa13.92□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF860A6NHJ4 632 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 HCN1O60741 890 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 KHDRBS3O75525 346 aaKnown RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 GPX2P18283 190 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 PTGES3Q15185 160 aaKnown RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 CYHR1Q6ZMK1 362 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 HMGN2P46Q86SG4 172 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 MARCH7Q9H992 704 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 MOV10Q9HCE1 1003 aaKnown RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 MRPL39Q9NYK5 338 aaKnown RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 MALT1Q9UDY8 824 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 PLXNB2O15031 1838 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 SLC6A12P48065 614 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 VLDLRP98155 873 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 E2F2Q14209 437 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 TMED9Q9BVK6 235 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ELOA3DA6NLF2 546 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 KIAA0513O60268 411 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 TRA2BP62995 288 aaKnown RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF181Q2M3W8 571 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ELOA3BQ3SY89 546 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ELOA3Q8NG57 546 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ZFP90Q8TF47 636 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 NUDT8Q8WV74 236 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 LRR1Q96L50 414 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 GPN2Q9H9Y4 310 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF222Q9UK12 451 aa13.91□□□□□ -0.18
HDAC6-220ENST00000477528 OR6C74A6NCV1 312 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 WASH3PC4AMC7 463 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 SLITRK5O94991 958 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 HOXA9P31269 272 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 GBX2P52951 348 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ENPP2Q13822 863 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 TAF13Q15543 124 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 BCL7AQ4VC05 210 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 OR5K4A6NMS3 321 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms