RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GOLGA8SH3BPF8 625 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ADAM12O43184 909 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ZWINTO95229 277 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CKMT2P17540 419 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DNAJB1P25685 340 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 MSNP26038 577 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 CDH5P33151 784 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 CLCN4P51793 760 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TKTL1P51854 596 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CDH11P55287 796 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CCZ1BP86790 482 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CCZ1P86791 482 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 ADIGQ0VDE8 80 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TWF1Q12792 350 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PLA2G7Q13093 441 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PRKAA1Q13131 559 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 MTF1Q14872 753 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TCTE1Q5JU00 501 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CFAP58Q5T655 872 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 SDHAF4Q5VUM1 108 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PMF1Q6P1K2 205 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DNAJC24Q6P3W2 148 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DCUN1D2Q6PH85 259 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PAQR9Q6ZVX9 377 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 P2RY8Q86VZ1 359 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PHF13Q86YI8 300 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 TMEM139Q8IV31 216 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 MCOLN2Q8IZK6 566 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 NUP93Q8N1F7 819 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ARHGAP18Q8N392 663 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 POMGNT2Q8NAT1 580 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 OR2AJ1Q8NGZ0 328 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 RNF128Q8TEB7 428 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 SNRNP27Q8WVK2 155 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 ATL1Q8WXF7 558 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CASP10Q92851 521 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 SPATA17Q96L03 361 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DGAT2Q96PD7 388 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 KCNK16Q96T55 309 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PCDHB18PQ96TA0 734 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 PKMYT1Q99640 499 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DESI2Q9BSY9 194 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 MCRIP2Q9BUT9 160 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 TRIM62Q9BVG3 475 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TSGA10Q9BZW7 698 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 VN1R1Q9GZP7 353 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 WNT5BQ9H1J7 359 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 DPAGT1Q9H3H5 408 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CSNK1G1Q9HCP0 422 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 MRPL47Q9HD33 250 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 EQTNQ9NQ60 294 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ZNF71Q9NQZ8 489 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 COMMD8Q9NX08 183 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 NKIRAS2Q9NYR9 191 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 CPSF2Q9P2I0 782 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 UXTQ9UBK9 157 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 OSGIN1Q9UJX0 560 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ASB3Q9Y575 518 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ATG2AQ2TAZ0 1938 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 GREB1Q4ZG55 1949 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 TRIOBPQ9H2D6 2365 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 A0A1W2PN81 502 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 MACROD2A1Z1Q3 448 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 TMEM221A6NGB7 291 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 EPOPA6NHQ4 379 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 TMEM110-MUSTN1A8MSY1 372 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 E9PI62 339 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CCL16O15467 120 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 XRCC3O43542 346 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 HSF2BPO75031 334 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 GRAP2O75791 330 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 MOCS3O95396 460 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 LCA5LO95447 670 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 SEC24AO95486 1093 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 FGF19O95750 216 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 EML2O95834 649 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 WDPCPO95876 746 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CLPTM1O96005 669 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 LINGO3P0C6S8 592 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 OR2T7P0C7T2 308 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 RALAP11233 206 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 KRT3P12035 628 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 EPCAMP16422 314 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ATF6P18850 670 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CEACAM8P31997 349 aaPredicted RBP3.53□□□□□ -1.84
UBR3-209ENST00000477461 CHRNA7P36544 502 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 SSR1P43307 286 aaKnown RBP3.53□□□□□ -1.84
UBR3-209ENST00000477461 SLC6A12P48065 614 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 SLC9A3P48764 834 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 SNAPC1Q16533 368 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 PTPN20Q4JDL3 420 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 C2CD6Q53TS8 623 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 TCEAL5Q5H9L2 206 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 CYP4A22Q5TCH4 519 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 FAM183BPQ6ZVS7 135 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ADGRD2Q7Z7M1 963 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 PHLDB2Q86SQ0 1253 aa3.53□□□□□ -1.84
UBR3-209ENST00000477461 ZNF554Q86TJ5 538 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms