RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 LRRC25Q8N386 305 aaPredicted RBP27.57■■■□□ 2
HOXB3-208ENST00000476342 SIRT6Q8N6T7 355 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 PSMF1Q92530 271 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 GFM2Q969S9 779 aaKnown RBP27.57■■■□□ 2
HOXB3-208ENST00000476342 CNRIP1Q96F85 164 aaPredicted RBP27.57■■■□□ 2
HOXB3-208ENST00000476342 OR8D2Q9GZM6 311 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 SLC25A18Q9H1K4 315 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 SLC35C2Q9NQQ7 365 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 PTGFRNQ9P2B2 879 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 FAM208BQ5VWN6 2430 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 A0A1W2PS29 197 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 ATP1B1P05026 303 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 DDX5P17844 614 aaKnown RBP27.56■■■□□ 2
HOXB3-208ENST00000476342 GPR143P51810 404 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 LARP4Q71RC2 724 aaKnown RBP eCLIP27.56■■■□□ 2
HOXB3-208ENST00000476342 GALNT12Q8IXK2 581 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 AMER2Q8N7J2 671 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 OR1N1Q8NGS0 311 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 CLHC1Q8NHS4 586 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 REEP4Q9H6H4 257 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 TAS2R7Q9NYW3 318 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 USH1CQ9Y6N9 552 aa27.56■■■□□ 2
HOXB3-208ENST00000476342 DDAH2O95865 285 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 NT5EP21589 574 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 RPL3P39023 403 aaKnown RBP27.55■■■□□ 2
HOXB3-208ENST00000476342 ZNF750Q32MQ0 723 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 OGFOD2Q6N063 350 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 ISLR2Q6UXK2 745 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 DGAT2L6Q6ZPD8 337 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 HPS6Q86YV9 775 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 KIF2BQ8N4N8 673 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 SLC5A8Q8N695 610 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 MTERF3Q96E29 417 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 ZNF764Q96H86 408 aaPredicted RBP27.55■■■□□ 2
HOXB3-208ENST00000476342 FBXL20Q96IG2 436 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 ZNF681Q96N22 645 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 CNPPD1Q9BV87 410 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 DEFB126Q9BYW3 111 aa27.55■■■□□ 2
HOXB3-208ENST00000476342 EXO1Q9UQ84 846 aaKnown RBP27.55■■■□□ 2
HOXB3-208ENST00000476342 TNRC6AQ8NDV7 1962 aaKnown RBP27.54■■■□□ 2
HOXB3-208ENST00000476342 TRBV11-1A0A0K0K1C0 115 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 A8MUI8 341 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 LRATO95237 230 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 EPHA3P29320 983 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 HPCAL1P37235 193 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 H3F3CQ6NXT2 135 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 FAM180BQ6P0A1 224 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 R3HCC1LQ7Z5L2 792 aaKnown RBP27.54■■■□□ 2
HOXB3-208ENST00000476342 FAM9CQ8IZT9 166 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 TM9SF4Q92544 642 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 MAELQ96JY0 434 aaKnown RBP27.54■■■□□ 2
HOXB3-208ENST00000476342 BBS4Q96RK4 519 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 SEMA4CQ9C0C4 833 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 EPS8L2Q9H6S3 715 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 WDR55Q9H6Y2 383 aaPredicted RBP27.54■■■□□ 2
HOXB3-208ENST00000476342 CXorf21Q9HAI6 301 aa27.54■■■□□ 2
HOXB3-208ENST00000476342 ZNF71Q9NQZ8 489 aaPredicted RBP27.54■■■□□ 2
HOXB3-208ENST00000476342 GOLGA8QA0A0J9YX86 632 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 GOLGA8OA6NCC3 632 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 GOLGA8NF8WBI6 632 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 AKAP10O43572 662 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 TGDSO95455 350 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 NTSP30990 170 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 SOX11P35716 441 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 ZNF267Q14586 743 aaPredicted RBP27.53■■■□□ 2
HOXB3-208ENST00000476342 PTGR1Q14914 329 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 CEBPEQ15744 281 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 ASB18Q6ZVZ8 466 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 ZNF721Q8TF20 911 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 PPCDCQ96CD2 204 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 SENP5Q96HI0 755 aaPredicted RBP27.53■■■□□ 2
HOXB3-208ENST00000476342 ZNF354BQ96LW1 612 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.53■■■□□ 22e-6■□□□□ 10.4
HOXB3-208ENST00000476342 ERVK-19Q9WJR5 959 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 CPAMD8Q8IZJ3 1885 aa27.53■■■□□ 2
HOXB3-208ENST00000476342 TCP11X1B4DZS4 312 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 ZNF195O14628 629 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 TBX19O60806 448 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 G6PDP11413 515 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 MPIP34949 423 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 ABHD17BQ5VST6 288 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 HSDL2Q6YN16 418 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 CCDC116Q8IYX3 515 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 SLC39A7Q92504 469 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 LMF1Q96S06 567 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 MAPRE3Q9UPY8 281 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 ATRXP46100 2492 aa27.52■■■□□ 2
HOXB3-208ENST00000476342 PDGFAP04085 211 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 PCSK2P16519 638 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 MFAP5Q13361 173 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 PDE7AQ13946 482 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 SLC9B1Q4ZJI4 515 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 B3GNTL1Q67FW5 361 aaPredicted RBP27.51■■□□□ 1.99
HOXB3-208ENST00000476342 NXNQ6DKJ4 435 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 MAVSQ7Z434 540 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 SPATA19Q7Z5L4 167 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 LGI4Q8N135 537 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 OR8K3Q8NH51 312 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 ACTRT2Q8TDY3 377 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 BRINP2Q9C0B6 783 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms