RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 S1PR1P21453 382 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SERPINB1P30740 379 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 CHRNB4P30926 498 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SSTR4P31391 388 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 MAGEA12P43365 314 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ARFIP1P53367 373 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 HERVK_113P63132 956 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ERVK-8P63133 956 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 CUL3Q13618 768 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SNTB1Q13884 538 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 GTF2H2Q13888 395 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF267Q14586 743 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 EBPQ15125 230 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 FAM83EQ2M2I3 478 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 PRAMEF20Q5VT98 475 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 FNDC7Q5VTL7 733 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SLC22A10Q63ZE4 541 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 BICRALQ6AI39 1079 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 GTF2H2CQ6P1K8 395 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 POMZP3Q6PJE2 187 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 GK5Q6ZS86 529 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 RPS27LQ71UM5 84 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 MYLK4Q86YV6 388 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ST13P4Q8IZP2 240 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 LRRC25Q8N386 305 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SLC15A4Q8N697 577 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SIMC1Q8NDZ2 872 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 OR5M3Q8NGP4 307 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ASB5Q8WWX0 329 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 NRGNQ92686 78 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 RIT1Q92963 219 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 NTNG2Q96CW9 530 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 NSUN5Q96P11 429 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 DGAT2Q96PD7 388 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ERVK-6Q9BXR3 956 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 FUT8Q9BYC5 575 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 WWTR1Q9GZV5 400 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 RAB17Q9H0T7 212 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ACSS3Q9H6R3 686 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ACTR8Q9H981 624 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 KCNJ16Q9NPI9 418 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 TEX10Q9NXF1 929 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 PSD3Q9NYI0 1048 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 NINJ2Q9NZG7 142 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 COQ3Q9NZJ6 369 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 COPS7AQ9UBW8 275 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ADGRE2Q9UHX3 823 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF225Q9UK10 706 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ACAD8Q9UKU7 415 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 CNOT11Q9UKZ1 510 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ERVK-19Q9WJR5 959 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 PCDHGA11Q9Y5H2 935 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.46□□□□□ -1.38
HDAC3-207ENST00000475549 ZFHX3Q15911 3703 aa6.46□□□□□ -1.38
HDAC3-207ENST00000475549 CCDC189A1A4V9 331 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 SYCE1LA8MT33 242 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ACOT7O00154 380 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 BCKDKO14874 412 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 UGDHO60701 494 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 HCN1O60741 890 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CLDN9O95484 217 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 P04436 131 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 GFAPP14136 432 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 COX7A2P14406 83 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CAPN3P20807 821 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 TYK2P29597 1187 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ECHS1P30084 290 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 TLX1P31314 330 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 MAN2A2P49641 1150 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 RAP1GDS1P52306 607 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 WNT3P56703 355 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 FBXW4P57775 412 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 PLIN5Q00G26 463 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 MGAT2Q10469 447 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 FUT7Q11130 342 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 TRAF3Q13114 568 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 DUSP8Q13202 625 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 BIKQ13323 160 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 NAB1Q13506 487 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 TECRLQ5HYJ1 363 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 DESI1Q6ICB0 168 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 B3GNT6Q6ZMB0 384 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ACAD11Q709F0 780 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 RELL1Q8IUW5 271 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 MMP21Q8N119 569 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 EID3Q8N140 333 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 FBXW8Q8N3Y1 598 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF615Q8N8J6 731 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 PTGR2Q8N8N7 351 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 NAXEQ8NCW5 288 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 CHTF18Q8WVB6 975 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ISL2Q96A47 359 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 ADIPOR1Q96A54 375 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 PHF21BQ96EK2 531 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 GAL3ST4Q96RP7 486 aa6.45□□□□□ -1.38
HDAC3-207ENST00000475549 MRPL1Q9BYD6 325 aaKnown RBP6.45□□□□□ -1.38
HDAC3-207ENST00000475549 VPS11Q9H270 941 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms