RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ASGR2P07307 311 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 FHP07954 510 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 IFI6P09912 130 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SLC35G6P0C7Q6 338 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 CHRNB1P11230 501 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SRFP11831 508 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 GABRB1P18505 474 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 CSNK2A2P19784 350 aaPredicted RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 MAGP20916 626 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 MATN1P21941 496 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 EEF1B2P24534 225 aaKnown RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 CD6P30203 668 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 GPC1P35052 558 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 MAN2A2P49641 1150 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 ANXA11P50995 505 aaKnown RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 NCBP2P52298 156 aaKnown RBP eCLIP9.26□□□□□ -0.933e-6■■□□□ 12.2
USP39-214ENST00000474572 DGKEP52429 567 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 LIM2P55344 173 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 CSNK2BP67870 215 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 RPP38P78345 283 aaKnown RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 TNFRSF17Q02223 184 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 ILF3Q12906 894 aaKnown RBP eCLIP9.26□□□□□ -0.93
USP39-214ENST00000474572 TP53BP2Q13625 1128 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 GPR18Q14330 331 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 KIR2DS5Q14953 304 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 NEDD8Q15843 81 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SPDYE7PQ495Y7 208 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 TMEM31Q5JXX7 168 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 C18orf63Q68DL7 685 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 ZNF770Q6IQ21 691 aaPredicted RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 BHLHB9Q6PI77 547 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 RNF44Q7L0R7 432 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SLC5A8Q8N695 610 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SMYD1Q8NB12 490 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 RAB8BQ92930 207 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 FKBP10Q96AY3 582 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 COG8Q96MW5 612 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 BBS4Q96RK4 519 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 NODALQ96S42 347 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 SERINC2Q96SA4 455 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 ZNF607Q96SK3 696 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 FEVQ99581 238 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 NIPSNAP1Q9BPW8 284 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 MAPKAP1Q9BPZ7 522 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 MACROD1Q9BQ69 325 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 BTBD2Q9BX70 525 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 GSDMCQ9BYG8 508 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 LHPPQ9H008 270 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 C6orf106Q9H6K1 298 aaPredicted RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 CCNB1IP1Q9NPC3 277 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 KCMF1Q9P0J7 381 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 PHF11Q9UIL8 331 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 FBXW2Q9UKT8 454 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 KLHL20Q9Y2M5 609 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 DSPPQ9NZW4 1301 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 TMEM131Q92545 1883 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 MYO10Q9HD67 2058 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SPTY2D1-AS1A0A0U1RR47 76 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 URADA6NGE7 173 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 WASHC1A8K0Z3 465 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 C2orf74A8MZ97 194 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 H3BQ06 376 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 P2RX6O15547 441 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 EMC8O43402 210 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 PCDHGA12O60330 932 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 CTSVO60911 334 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 CCNB2O95067 398 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 ATE1O95260 518 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 EPPINO95925 133 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 STATHP02808 62 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 ZNF888P0CJ79 500 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 OR12D1P0DN82 309 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 NR2F6P10588 404 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 CYP4B1P13584 511 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 CRISP3P54108 245 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 GP2P55259 537 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 RAB8AP61006 207 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SNRPNP63162 240 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 MVKQ03426 396 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 GPR19Q15760 415 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SYPL1Q16563 259 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 COLEC12Q5KU26 742 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 EXOSC6Q5RKV6 272 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 MANEAQ5SRI9 462 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 GPR107Q5VW38 600 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 TCTN3Q6NUS6 607 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 FIGLAQ6QHK4 219 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 FAM92BQ6ZTR7 304 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 RD3Q7Z3Z2 195 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 TRIM73Q86UV7 250 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 RBM12BQ8IXT5 1001 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 KCT2Q8NC54 265 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 BPIFB6Q8NFQ5 453 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms