RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 XKP51811 444 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 TRA2BP62995 288 aaKnown RBP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 SRSF1Q07955 248 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 MPP2Q14168 576 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF267Q14586 743 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 IMPG1Q17R60 797 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF324BQ6AW86 544 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 FAM180AQ6UWF9 173 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 OR6Y1Q8NGX8 325 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 OR2T11Q8NH01 316 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 OR8K3Q8NH51 312 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 FAR1Q8WVX9 515 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 RIT1Q92963 219 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 PGM2Q96G03 612 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 RASL10BQ96S79 203 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 CXorf21Q9HAI6 301 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 SSU72Q9NP77 194 aaKnown RBP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 SIRT5Q9NXA8 310 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 DLGAP4Q9Y2H0 992 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 PCDHGB6Q9Y5F9 930 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 RP1L1Q8IWN7 2480 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 GNG14A0A1W2PPG7 69 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 ERLIN1O75477 346 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 ERAL1O75616 437 aaKnown RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 SLC25A12O75746 678 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 RSL1D1O76021 490 aaKnown RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 RASAL1O95294 804 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 CBX6O95503 412 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 SP1P08047 785 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 CPMP14384 443 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 GALNSP34059 522 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 SERPINB4P48594 390 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 ALDH9A1P49189 494 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 CYB561P49447 251 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 SLC37A1P57057 533 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 GALNTL5Q7Z4T8 443 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 KLHL29Q96CT2 875 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 CNRIP1Q96F85 164 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 C5orf34Q96MH7 638 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 SLX1AQ9BQ83 275 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 FAIM2Q9BWQ8 316 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 AGPAT4Q9NRZ5 378 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 YARS2Q9Y2Z4 477 aaKnown RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 POLR3HQ9Y535 204 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-210ENST00000473829 DNAJC15Q9Y5T4 150 aa17.56■□□□□ 0.4
PTCD3-210ENST00000473829 DYRK3O43781 588 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 NME2P1O60361 137 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 OR6B1O95007 311 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 ANXA4P09525 319 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-210ENST00000473829 CD46P15529 392 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 NME2P22392 152 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SSTR4P31391 388 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SOX18P35713 384 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 FEN1P39748 380 aaKnown RBP17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SOX3P41225 446 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SSR4P51571 173 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 TDGF1P3P51864 188 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 UGT3A2Q3SY77 523 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SLC25A25Q6KCM7 469 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 Q6ZSR9 355 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 MDGA2Q7Z553 956 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 CYP4Z2PQ8N1L4 340 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 TMEM156Q8N614 296 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 BCORP1Q8N888 145 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 AGR3Q8TD06 166 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 ART5Q96L15 291 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF681Q96N22 645 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 RRAGDQ9NQL2 400 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-210ENST00000473829 OLAHQ9NV23 265 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 CROCCQ5TZA2 2017 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 SVILO95425 2214 aa17.55■□□□□ 0.4
PTCD3-210ENST00000473829 ESPL1Q14674 2120 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 COL12A1Q99715 3063 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 WDR91A4D1P6 747 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 CLEC18AA5D8T8 446 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 CDK2AP1O14519 115 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 WISP2O76076 250 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 FGF4P08620 206 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 DHRS4L1P0CG22 281 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 PORP16435 677 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-210ENST00000473829 NT5EP21589 574 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 PRPH2P23942 346 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 MST1P26927 711 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF763Q0D2J5 394 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 KIAA0040Q15053 153 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 LTB4RQ15722 352 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 PRSS53Q2L4Q9 553 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 SH2D4BQ5SQS7 431 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 CLEC18BQ6UXF7 455 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 RNF111Q6ZNA4 994 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 RNF165Q6ZSG1 346 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 GALNT12Q8IXK2 581 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 HORMAD2Q8N7B1 307 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 CLEC18CQ8NCF0 446 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 NUBPLQ8TB37 319 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 NR4A3Q92570 626 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 UTS2RQ9UKP6 389 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 TRAF6Q9Y4K3 522 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms