RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 THOC3Q96J01 351 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-207ENST00000473420 ARHGAP9Q9BRR9 750 aa17.72■□□□□ 0.43
CTDSP1-207ENST00000473420 CCDC28BQ9BUN5 200 aa17.72■□□□□ 0.43
CTDSP1-207ENST00000473420 SEMA4CQ9C0C4 833 aa17.72■□□□□ 0.43
CTDSP1-207ENST00000473420 ATP6V1HQ9UI12 483 aa17.72■□□□□ 0.43
CTDSP1-207ENST00000473420 CPAMD8Q8IZJ3 1885 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 A0A1W2PS29 197 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 MYO1GB0I1T2 1018 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 MKRN2OSH3BPM6 223 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 SCAMP2O15127 329 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 DNAJB5O75953 348 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 LRATO95237 230 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 ALDOCP09972 364 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 FEN1P39748 380 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 CLDN8P56748 225 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 C6orf163Q5TEZ5 329 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 NXNQ6DKJ4 435 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 RIMKLAQ8IXN7 391 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 RIT1Q92963 219 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 GFM2Q969S9 779 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 PPCDCQ96CD2 204 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 VMP1Q96GC9 406 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 OR52B2Q96RD2 323 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 CXorf21Q9HAI6 301 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 TCF7L2Q9NQB0 619 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 AIG1Q9NVV5 245 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 GPR83Q9NYM4 423 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 LHX6Q9UPM6 363 aa17.71■□□□□ 0.43
CTDSP1-207ENST00000473420 POLR3GO15318 223 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 AKAP10O43572 662 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 DDAH2O95865 285 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 VIMP08670 466 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 ITGAMP11215 1152 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 NTSP30990 170 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 MPIP34949 423 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 IDH3AP50213 366 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 CLCN2P51788 898 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF750Q32MQ0 723 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 LSM12Q3MHD2 195 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 H3F3CQ6NXT2 135 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 DGAT2L6Q6ZPD8 337 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 GALNT12Q8IXK2 581 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 NATD1Q8N6N6 113 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 OR1N1Q8NGS0 311 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF675Q8TD23 568 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 NCLNQ969V3 563 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 FBXL20Q96IG2 436 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 BBS4Q96RK4 519 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 BRINP2Q9C0B6 783 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 FGFR1OP2Q9NVK5 253 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 FAM53CQ9NYF3 392 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 PCDHGB7Q9Y5F8 929 aa17.7■□□□□ 0.42
CTDSP1-207ENST00000473420 GABRR3A8MPY1 467 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SLITRK5O94991 958 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 IGKV3-11P04433 115 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 CELA2AP08217 269 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 TROVE2P10155 538 aaKnown RBP eCLIP17.69■□□□□ 0.423e-6■□□□□ 9.2
CTDSP1-207ENST00000473420 IDO1P14902 403 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 NT5EP21589 574 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 FRKP42685 505 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 IRX1P78414 480 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 DUSP2Q05923 314 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 MAP4K2Q12851 820 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 KCNAB2Q13303 367 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 GSTA3Q16772 222 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 PRSS53Q2L4Q9 553 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 PRICKLE4Q2TBC4 344 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 CAMKMTQ7Z624 323 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 FDCSPQ8NFU4 85 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SUN3Q8TAQ9 357 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF721Q8TF20 911 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 PSMF1Q92530 271 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SENP5Q96HI0 755 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 PRPF18Q99633 342 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SMAD5Q99717 465 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 EBF4Q9BQW3 602 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SLC25A23Q9BV35 468 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 DPY30Q9C005 99 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF552Q9H707 407 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 KCNK13Q9HB14 408 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 NPHS2Q9NP85 383 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 ATAD3AQ9NVI7 634 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 COPS7AQ9UBW8 275 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 CACNA1GO43497 2377 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 CACNA1BQ00975 2339 aa17.69■□□□□ 0.42
CTDSP1-207ENST00000473420 A6NL46 340 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 ANKRD28O15084 1053 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 UBDO15205 165 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 PDPK1O15530 556 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 IFI6P09912 130 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 SFTPCP11686 197 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 PGDP52209 483 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 CLNS1AP54105 237 aaKnown RBP17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 FUT7Q11130 342 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF267Q14586 743 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 DPY19L1Q2PZI1 675 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms