RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GPR83Q9NYM4 423 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 C5AR2Q9P296 337 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 BAIAP2L1Q9UHR4 511 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 ATP6V1HQ9UI12 483 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 LHX6Q9UPM6 363 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 CFAP47Q6ZTR5 3102 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 A8MUA0 341 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 DIAPH2O60879 1101 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 IFI6P09912 130 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 G6PDP11413 515 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 CLCN2P51788 898 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 MAP4K2Q12851 820 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 GSTA3Q16772 222 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 SLC9B1Q4ZJI4 515 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 CRB2Q5IJ48 1285 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 LGI4Q8N135 537 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 APCDD1LQ8NCL9 501 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 OR1N1Q8NGS0 311 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 OR8K3Q8NH51 312 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 ZNF675Q8TD23 568 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 EXOSC8Q96B26 276 aaKnown RBP18.64■□□□□ 0.57
SF1-213ENST00000472725 UBL7Q96S82 380 aaPredicted RBP18.64■□□□□ 0.57
SF1-213ENST00000472725 SLC25A23Q9BV35 468 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 CXorf21Q9HAI6 301 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 ATAD3AQ9NVI7 634 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 COPS7AQ9UBW8 275 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 TEKT2Q9UIF3 430 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 CACNA1BQ00975 2339 aa18.64■□□□□ 0.57
SF1-213ENST00000472725 MYO1GB0I1T2 1018 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 SCAMP2O15127 329 aaKnown RBP18.63■□□□□ 0.57
SF1-213ENST00000472725 POLR3GO15318 223 aaPredicted RBP18.63■□□□□ 0.57
SF1-213ENST00000472725 DDAH2O95865 285 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 TROVE2P10155 538 aaKnown RBP eCLIP18.63■□□□□ 0.57
SF1-213ENST00000472725 IDO1P14902 403 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 NTSP30990 170 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 AQP5P55064 265 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 DIO3P55073 304 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 KCNAB2Q13303 367 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 PTGR1Q14914 329 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 DPY19L1Q2PZI1 675 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 AGAP7PQ5VUJ5 663 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 NXNQ6DKJ4 435 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 TCTN3Q6NUS6 607 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 CAMKMTQ7Z624 323 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 GALNT12Q8IXK2 581 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 RIMKLAQ8IXN7 391 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 ARMC10Q8N2F6 343 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 FDCSPQ8NFU4 85 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 SLC2A12Q8TD20 617 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 SENP5Q96HI0 755 aaPredicted RBP18.63■□□□□ 0.57
SF1-213ENST00000472725 AGAP4Q96P64 663 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 BBS4Q96RK4 519 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 SMAD5Q99717 465 aaKnown RBP18.63■□□□□ 0.57
SF1-213ENST00000472725 BRINP2Q9C0B6 783 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 KCNK13Q9HB14 408 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 TCF7L2Q9NQB0 619 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 AIG1Q9NVV5 245 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 EPG5Q9HCE0 2579 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 ZZEF1O43149 2961 aa18.63■□□□□ 0.57
SF1-213ENST00000472725 GOLGA8QA0A0J9YX86 632 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 GOLGA8OA6NCC3 632 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 GABRR3A8MPY1 467 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 GOLGA8NF8WBI6 632 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 DNAJB5O75953 348 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 IGKV3-11P04433 115 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 VIMP08670 466 aaKnown RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 FEN1P39748 380 aaKnown RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 FRKP42685 505 aaPredicted RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 IDH3AP50213 366 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 CLNS1AP54105 237 aaKnown RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 LSM12Q3MHD2 195 aaKnown RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 SLC5A8Q8N695 610 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 OR7G1Q8NGA0 311 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 CLHC1Q8NHS4 586 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 ZFP28Q8NHY6 868 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 ZNF721Q8TF20 911 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 PSMF1Q92530 271 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 NCLNQ969V3 563 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 PPWD1Q96BP3 646 aaKnown RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 COQ8BQ96D53 544 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 LMF1Q96S06 567 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 DPY30Q9C005 99 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 ZNF552Q9H707 407 aaPredicted RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 ACSS1Q9NUB1 689 aaPredicted RBP18.62■□□□□ 0.57
SF1-213ENST00000472725 SH3BP4Q9P0V3 963 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 ZNF451Q9Y4E5 1061 aa18.62■□□□□ 0.57
SF1-213ENST00000472725 MYOCOSA0A1B0GUC4 107 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 OR6C76A6NM76 312 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 UBDO15205 165 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 AKAP10O43572 662 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 BCAS2O75934 225 aaPredicted RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 ZFAND5O76080 213 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 LRATO95237 230 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 ALDOCP09972 364 aaKnown RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 ITGAMP11215 1152 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 NT5EP21589 574 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 MRPL19P49406 292 aaKnown RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 SRSF11Q05519 484 aaKnown RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 FUT7Q11130 342 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 MLC1Q15049 377 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms