RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR6T1Q8NGN1 323 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 CABS1Q96KC9 395 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 GANQ9H2C0 597 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 IL1RL2Q9HB29 575 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 TAS2R16Q9NYV7 291 aa4.35□□□□□ -1.71
CLK1-209ENST00000472679 FOXI3A8MTJ6 420 aaPredicted RBP4.34□□□□□ -1.71
CLK1-209ENST00000472679 MEI4A8MW99 385 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 MATKP42679 507 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 GEMP55040 296 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 ACTN3Q08043 901 aaPredicted RBP4.34□□□□□ -1.71
CLK1-209ENST00000472679 VWA2Q5GFL6 755 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 C1orf189Q5VU69 101 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 RTL6Q6ICC9 239 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 B3GLCTQ6Y288 498 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 MARCH9Q86YJ5 346 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 CNTN4Q8IWV2 1026 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 FLVCR1-AS1Q8TAF5 88 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 COG3Q96JB2 828 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 CAPNS2Q96L46 248 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 SLC7A10Q9NS82 523 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 ACOXLQ9NUZ1 547 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 CLEC5AQ9NY25 188 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 ARMCX1Q9P291 453 aa4.34□□□□□ -1.71
CLK1-209ENST00000472679 RCOR3Q9P2K3 495 aaPredicted RBP4.34□□□□□ -1.71
CLK1-209ENST00000472679 EIF3KQ9UBQ5 218 aaKnown RBP4.34□□□□□ -1.71
CLK1-209ENST00000472679 E9PAM4 449 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 PHOX2AO14813 284 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 ZNF253O75346 499 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 REC8O95072 547 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 MMP10P09238 476 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 TRIM23P36406 574 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 ALDH3B1P43353 468 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 NPRL3Q12980 569 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 TRADDQ15628 312 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 C17orf58Q2M2W7 97 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 REP15Q6BDI9 236 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 STEAP1BQ6NZ63 245 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 Q6ZR54 194 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 ZNF410Q86VK4 478 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 RAB3CQ96E17 227 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 KCNMB3Q9NPA1 279 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 MID1IP1Q9NPA3 183 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 RALGAPA1Q6GYQ0 2036 aa4.33□□□□□ -1.72
CLK1-209ENST00000472679 RNF212BA8MTL3 300 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 CCER2I3L3R5 266 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 TLR4O00206 839 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 E2F3O00716 465 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 TSPAN2O60636 221 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 CXCL14O95715 111 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 FCGR3AP08637 254 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 FERP16591 822 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 RPA4Q13156 261 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 EXOSC7Q15024 291 aaKnown RBP4.32□□□□□ -1.72
CLK1-209ENST00000472679 ANKRD55Q3KP44 614 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 ODF2Q5BJF6 829 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 SNX32Q86XE0 403 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 LINC00518Q8N0U6 118 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 ZNF713Q8N859 430 aaPredicted RBP4.32□□□□□ -1.72
CLK1-209ENST00000472679 FBXO25Q8TCJ0 367 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 AGAP11Q8TF27 550 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 RPGRIP1Q96KN7 1286 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 GPR137Q96N19 417 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
CLK1-209ENST00000472679 FAM213AQ9BRX8 229 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 Q9HAA7 133 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 ZNF107Q9UII5 783 aaPredicted RBP4.32□□□□□ -1.72
CLK1-209ENST00000472679 TEX264Q9Y6I9 313 aa4.32□□□□□ -1.72
CLK1-209ENST00000472679 A0A1W2PQ72 361 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 VEGFDO43915 354 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 FCER2P06734 321 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 SFTPBP07988 381 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 MBL2P11226 248 aaPredicted RBP4.31□□□□□ -1.72
CLK1-209ENST00000472679 FCARP24071 287 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 OAS2P29728 719 aaKnown RBP4.31□□□□□ -1.72
CLK1-209ENST00000472679 PITPNBP48739 271 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 KRTAP10-3P60369 221 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 RPS4XP62701 263 aaKnown RBP4.31□□□□□ -1.72
CLK1-209ENST00000472679 GALK2Q01415 458 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 KLF5Q13887 457 aaPredicted RBP4.31□□□□□ -1.72
CLK1-209ENST00000472679 ABRAXAS2Q15018 415 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 RHBDD2Q6NTF9 364 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 CDC42EP5Q6NZY7 148 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 SPEM1Q8N4L4 309 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 RAB39BQ96DA2 213 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 SPATA13Q96N96 652 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 RANBP9Q96S59 729 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 ST6GALNAC5Q9BVH7 336 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 PIGVQ9NUD9 493 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 AKAP7Q9P0M2 348 aaPredicted RBP4.31□□□□□ -1.72
CLK1-209ENST00000472679 AGRNO00468 2067 aa4.31□□□□□ -1.72
CLK1-209ENST00000472679 TRAV9-2A0A087WT02 112 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 CCDC69A6NI79 296 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 K7ERI5 159 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 SH2D1BO14796 132 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 MCF2LO15068 1137 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 SRPX2O60687 465 aaPredicted RBP4.3□□□□□ -1.72
CLK1-209ENST00000472679 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 PDGFBP01127 241 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms