RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SNX15Q9NRS6 342 aa12.72□□□□□ -0.37
SMURF1-203ENST00000472627 IARS2Q9NSE4 1012 aaKnown RBP12.72□□□□□ -0.37
SMURF1-203ENST00000472627 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
SMURF1-203ENST00000472627 CDC7O00311 574 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 SNPHO15079 494 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 WDR47O94967 919 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 CPN1P15169 458 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 CPN2P22792 545 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 ID2Q02363 134 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 GPS1Q13098 491 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 EIPR1Q53HC9 387 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 FRA10AC1Q70Z53 315 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 BTLAQ7Z6A9 289 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 GRAMD2AQ8IUY3 354 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 C2CD4AQ8NCU7 369 aaPredicted RBP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 TMEM41AQ96HV5 264 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 GNRHR2Q96P88 292 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 KRT12Q99456 494 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 TBCDQ9BTW9 1192 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 WWTR1Q9GZV5 400 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 TEX10Q9NXF1 929 aaPredicted RBP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 MS4A12Q9NXJ0 267 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 FETUBQ9UGM5 382 aa12.71□□□□□ -0.37
SMURF1-203ENST00000472627 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
SMURF1-203ENST00000472627 DOCK7Q96N67 2140 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-203ENST00000472627 OR10H2O60403 315 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 CRHP06850 196 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 KRT15P19012 456 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 TLX1P31314 330 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-203ENST00000472627 CD79BP40259 229 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 MAGEA6P43360 314 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 KCNJ5P48544 419 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 VPS41P49754 854 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 CDKN2DP55273 166 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 CDKL1Q00532 357 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 TNK1Q13470 666 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 SETDB1Q15047 1291 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 KBTBD12Q3ZCT8 623 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 PAGE2BQ5JRK9 111 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 DCST1Q5T197 706 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 OR2A2Q6IF42 318 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 SLCO4C1Q6ZQN7 724 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 P4HA3Q7Z4N8 544 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 OR1J4Q8NGS1 313 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 SPPL2AQ8TCT8 520 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 SLC44A1Q8WWI5 657 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 TUBA1CQ9BQE3 449 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 TRIM5Q9C035 493 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 ELOVL5Q9NYP7 299 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 GPRC5BQ9NZH0 403 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 ADGRE2Q9UHX3 823 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
SMURF1-203ENST00000472627 CORO1CQ9ULV4 474 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-203ENST00000472627 NCKAP5O14513 1909 aa12.7□□□□□ -0.38
SMURF1-203ENST00000472627 C2orf92A0A1B0GVN3 265 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 CLGNO14967 610 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 CCDC175P0C221 793 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 NID1P14543 1247 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 POU2F1P14859 743 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 ALOX15P16050 662 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 NAGLUP54802 743 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 HERVK_113P63132 956 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 ERVK-8P63133 956 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 TIAL1Q01085 375 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 SRYQ05066 204 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 PCDH1Q08174 1060 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 CLEC12BQ2HXU8 276 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 SPRED3Q2MJR0 410 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 AP5B1Q2VPB7 878 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 RBM20Q5T481 1227 aaKnown RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 TIGD3Q6B0B8 471 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 HIST2H2AA3Q6FI13 130 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 AAGABQ6PD74 315 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 SBSNQ6UWP8 590 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 MILR1Q7Z6M3 343 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 ST13P4Q8IZP2 240 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 RNF10Q8N5U6 811 aaKnown RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 MCUQ8NE86 351 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 FAM83FQ8NEG4 500 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-203ENST00000472627 TANKQ92844 425 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 CAVIN3Q969G5 261 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 TP53INP1Q96A56 240 aa12.69□□□□□ -0.38
SMURF1-203ENST00000472627 ANKRD9Q96BM1 317 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms