RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 TMEM125Q96AQ2 219 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 PELOQ9BRX2 385 aaKnown RBP18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 NANOGQ9H9S0 305 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 POLR1BQ9H9Y6 1135 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 CTSFQ9UBX1 484 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 NXT1Q9UKK6 140 aaKnown RBP18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 VPS4AQ9UN37 437 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 PCDHGB4Q9UN71 923 aa18.23■□□□□ 0.51
CHMP2B-204ENST00000472024 PTPRBP23467 1997 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 LDB3O75112 727 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 KLK3P07288 261 aaPredicted RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ABCB1P08183 1280 aaPredicted RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ZGLP1P0C6A0 271 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 UQCRC2P22695 453 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 PPIBP23284 216 aaKnown RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 SOX18P35713 384 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 FEN1P39748 380 aaKnown RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 STT3AP46977 705 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 EFNA3P52797 238 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 MXRA7P84157 204 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 MGAT2Q10469 447 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 COL9A2Q14055 689 aaPredicted RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 NKG7Q16617 165 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ZNF750Q32MQ0 723 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ZNF628Q5EBL2 1059 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 TMEM164Q5U3C3 297 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ZNF551Q7Z340 670 aaPredicted RBP18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 SLC15A3Q8IY34 581 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 MOAP1Q96BY2 351 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 CTHRC1Q96CG8 243 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 SPSB2Q99619 263 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 SH3GL1Q99961 368 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 SLC39A3Q9BRY0 314 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 CXorf36Q9H7Y0 433 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 ACSL6Q9UKU0 697 aa18.22■□□□□ 0.51
CHMP2B-204ENST00000472024 A0A087WV62 115 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 TCRBV16S1A1N1A0A5B0 115 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 AGRPO00253 132 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 DNAJA2O60884 412 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 B4GALT2O60909 372 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CNOT3O75175 753 aaKnown RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 JRKO75564 520 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 DXOO77932 396 aaKnown RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CPSF4O95639 269 aaKnown RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CD63P08962 238 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 EFNA1P20827 205 aaPredicted RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CD82P27701 267 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CDK9P50750 372 aaKnown RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 BTG2P78543 158 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 OCA2Q04671 838 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 VAC14Q08AM6 782 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 SLC13A2Q13183 592 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 ERV3-1Q14264 604 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CAPRIN1Q14444 709 aaKnown RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 GTDC1Q4AE62 458 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 VWA2Q5GFL6 755 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 C3orf38Q5JPI3 329 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 LCN10Q6JVE6 187 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 FAM180BQ6P0A1 224 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 BNC2Q6ZN30 1099 aaPredicted RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 OR4N5Q8IXE1 308 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CCDC116Q8IYX3 515 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 RBCK1Q9BYM8 510 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 VN1R1Q9GZP7 353 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 NECTIN3Q9NQS3 549 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 SEMA3GQ9NS98 782 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CMTM6Q9NX76 183 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 IFT80Q9P2H3 777 aaPredicted RBP18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 CD300AQ9UGN4 299 aa18.21■□□□□ 0.51
CHMP2B-204ENST00000472024 NUP214P35658 2090 aaPredicted RBP18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 CDRT15L2A8MXV6 281 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 NME4O00746 187 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 PLOD3O60568 738 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 PSMG1O95456 288 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 RAB40ALP0C0E4 278 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 C8orf89P0DMQ9 161 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 GPX2P18283 190 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 MVDP53602 400 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 PLIN5Q00G26 463 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 MAP4K2Q12851 820 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 FXNQ16595 210 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 PRICKLE4Q2TBC4 344 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 PIGGQ5H8A4 983 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 FHL5Q5TD97 284 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 SAXO2Q658L1 398 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 C6orf15Q6UXA7 325 aaPredicted RBP18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 DNAJC14Q6Y2X3 702 aaPredicted RBP18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 OR2L13Q8N349 312 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 GALNT6Q8NCL4 622 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 OR9A2Q8NGT5 310 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 UTP4Q969X6 686 aaKnown RBP18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 ELP4Q96EB1 424 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 NEURL3Q96EH8 262 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 ZNF578Q96N58 590 aaPredicted RBP18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 SLC46A1Q96NT5 459 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 ALOXE3Q9BYJ1 711 aa18.2■□□□□ 0.5
CHMP2B-204ENST00000472024 CHST8Q9H2A9 424 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms