RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ZDHHC14Q8IZN3 488 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 MCFD2Q8NI22 146 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 SLC35F5Q8WV83 523 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 FBXW5Q969U6 566 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 MS4A4AQ96JQ5 239 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 F2RL3Q96RI0 385 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 CDX2Q99626 313 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 MCHR1Q99705 422 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ABCD2Q9UBJ2 740 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 TOPAZ1Q8N9V7 1692 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 NPHS1O60500 1241 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 SRFP11831 508 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 EDNRBP24530 442 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 XCR1P46094 333 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 OR1D5P58170 312 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 SPERTQ8NA61 448 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 GMLQ99445 158 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ZNF334Q9HCZ1 680 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 NANSQ9NR45 359 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 OR52A4PA6NMU1 304 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 FBP2O00757 339 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 GABBR2O75899 941 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 FUT4P22083 530 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 PSMA1P25786 263 aaKnown RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 RACK1P63244 317 aaKnown RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 CDK6Q00534 326 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 HES1Q14469 280 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 HNRNPA1L2Q32P51 320 aaKnown RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 SLC35F1Q5T1Q4 408 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 RHBDF1Q96CC6 855 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 CHCHD6Q9BRQ6 235 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 CCDC28BQ9BUN5 200 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ZDHHC5Q9C0B5 715 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 MUC13Q9H3R2 512 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 CALHM2Q9HA72 323 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 NDUFA13Q9P0J0 144 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 FARSAQ9Y285 508 aaKnown RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 A0A1W2PPH5 198 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ENO4A6NNW6 628 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 MRPL33O75394 65 aaKnown RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 BMP1P13497 986 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 MSX2P35548 267 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 CHRFAM7AQ494W8 412 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 KANSL1Q7Z3B3 1105 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 NET1Q7Z628 596 aaPredicted RBP8.2□□□□□ -1.1
CD47-204ENST00000471694 TTC9BQ8N6N2 239 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ZFPM2Q8WW38 1151 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 KCNK12Q9HB15 430 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 ZBTB26Q9HCK0 441 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 SNTG1Q9NSN8 517 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 FAM86C1Q9NVL1 165 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 PLLPQ9Y342 182 aa8.2□□□□□ -1.1
CD47-204ENST00000471694 SOCS2O14508 198 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 F7P08709 466 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 NIPAL4Q0D2K0 466 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 UNC5DQ6UXZ4 953 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 GALNT11Q8NCW6 608 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SLC7A6OSQ96CW6 309 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 ZNF184Q99676 751 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 GNB4Q9HAV0 340 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 TOR1AO14656 332 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SHOXO15266 292 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 RFPL3O75679 317 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 MT-ND1P03886 318 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SLC5A2P31639 672 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SOX4Q06945 474 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 PNCKQ6P2M8 343 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 LRFN4Q6PJG9 635 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 IGFN1Q86VF2 1251 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 RAB8BQ92930 207 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SLC46A2Q9BY10 475 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 RNF225M0QZC1 329 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 VNN2O95498 520 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 DDAH2O95865 285 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ALDOBP05062 364 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 NDUFV2P19404 249 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SPINT3P49223 89 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ERVK-16P61578 105 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 CDK3Q00526 305 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 KLF1Q13351 362 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 ACSBG2Q5FVE4 666 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 AGAP7PQ5VUJ5 663 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ANKRD22Q5VYY1 191 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 LIPJQ5W064 366 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 PAMR1Q6UXH9 720 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 CDH24Q86UP0 819 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 KLHDC8AQ8IYD2 350 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SCCPDHQ8NBX0 429 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 OR10G2Q8NGC3 310 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SHKBP1Q8TBC3 707 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ELSPBP1Q96BH3 223 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 AGAP4Q96P64 663 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ERMAPQ96PL5 475 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 REEP4Q9H6H4 257 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms