RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TTLQ8NG68 377 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ZCCHC10Q8TBK6 192 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 BCAS4Q8TDM0 211 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ELP5Q8TE02 316 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 CCT6BQ92526 530 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SEC16BQ96JE7 1060 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 KCNA7Q96RP8 456 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ELAC2Q9BQ52 826 aaKnown RBP8.47□□□□□ -1.05
SF3A1-206ENST00000471037 MACROD1Q9BQ69 325 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 SARGQ9BW04 601 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 ELOVL6Q9H5J4 265 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 MEAF6Q9HAF1 191 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 LRFN1Q9P244 771 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PPT2Q9UMR5 302 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 FIS1Q9Y3D6 152 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 TIMM22Q9Y584 194 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 CACNA1CQ13936 2221 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 PCNX1Q96RV3 2341 aa8.47□□□□□ -1.05
SF3A1-206ENST00000471037 A0A0G2JND7 137 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SLC28A1O00337 649 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 MANBAO00462 879 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF195O14628 629 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 PRRG2O14669 202 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 PIP5K1BO14986 540 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 DIAPH2O60879 1101 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 FHP07954 510 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SLC35G6P0C7Q6 338 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 IGFBP2P18065 325 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SERPINB3P29508 390 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 TRHRP34981 398 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 AHRP35869 848 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 PIK3CBP42338 1070 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SCTRP47872 440 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ARFIP2P53365 341 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 AQP5P55064 265 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 HSF1Q00613 529 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 BTKQ06187 659 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 CSTF3Q12996 717 aaKnown RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 HERC3Q15034 1050 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 XKR7Q5GH72 579 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 RNFT1Q5M7Z0 435 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF468Q5VIY5 522 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 EPGNQ6UW88 154 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 MEX3BQ6ZN04 569 aaKnown RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 MAVSQ7Z434 540 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 TRIM46Q7Z4K8 759 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 RPS19BP1Q86WX3 136 aaKnown RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF227Q86WZ6 799 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 DDIASQ8IXT1 998 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 GBP7Q8N8V2 638 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 POGLUT1Q8NBL1 392 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 KCT2Q8NC54 265 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 OR7G3Q8NG95 312 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 RFWD2Q8NHY2 731 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 WDR20Q8TBZ3 569 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF473Q8WTR7 871 aaKnown RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 CA5BP1Q8WTZ4 195 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 C10orf82Q8WW14 230 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SLC13A3Q8WWT9 602 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 SELENOMQ8WWX9 145 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 TSLPQ969D9 159 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 PEX11GQ96HA9 241 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 NUF2Q9BZD4 464 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 RHBGQ9H310 441 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 TUBB1Q9H4B7 451 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 RABEP2Q9H5N1 569 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 CDCP1Q9H5V8 836 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 BRF2Q9HAW0 419 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 COQ3Q9NZJ6 369 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF490Q9ULM2 529 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-206ENST00000471037 NAALAD2Q9Y3Q0 740 aa8.46□□□□□ -1.06
SF3A1-206ENST00000471037 ZFHX3Q15911 3703 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 FEZF1A0PJY2 475 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 NPIPB8E9PQR5 432 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 FOXE1O00358 373 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SDHDO14521 159 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ZNHIT1O43257 154 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 RGS14O43566 566 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 LCMT2O60294 686 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 GALR3O60755 368 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 CDC123O75794 336 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 PCNAP12004 261 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 JAK1P23458 1154 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 TPP2P29144 1249 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 CYB561P49447 251 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 IDH3AP50213 366 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 HTR6P50406 440 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ST13P50502 369 aaKnown RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 OR4D2P58180 307 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 MLF1P58340 268 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 SKP1P63208 163 aa8.45□□□□□ -1.06
SF3A1-206ENST00000471037 MEF2AQ02078 507 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-206ENST00000471037 ACTN3Q08043 901 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms