RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 C15orf41Q9Y2V0 281 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 TESMINQ9Y4I5 508 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 MED12Q93074 2177 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 RTCAO00442 366 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 SH3BGRLO75368 114 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 SNX4O95219 450 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 TBX6O95947 436 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 SLCO1A2P46721 670 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 FBXW4P57775 412 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 HERVK_113P63132 956 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ERVK-8P63133 956 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF267Q14586 743 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 NHSL2Q5HYW2 709 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 FAM45BPQ6NSW5 357 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 DGAT2L6Q6ZPD8 337 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 VN1R5Q7Z5H4 357 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 YRDCQ86U90 279 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 GCNT2Q8N0V5 402 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ACOT4Q8N9L9 421 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 SRFBP1Q8NEF9 429 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 FAM45AQ8TCE6 357 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZPLD1Q8TCW7 415 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 PDLIM5Q96HC4 596 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 FBXL20Q96IG2 436 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 MED18Q9BUE0 208 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ERVK-6Q9BXR3 956 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 CAPS2Q9BXY5 557 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 PITHD1Q9GZP4 211 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 WWTR1Q9GZV5 400 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 PIGMQ9H3S5 423 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 KLHL28Q9NXS3 571 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 SLC17A6Q9P2U8 582 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 ERVK-19Q9WJR5 959 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 NPFFR2Q9Y5X5 522 aa17.31■□□□□ 0.36
NCKIPSD-209ENST00000470006 HEATR5AQ86XA9 2040 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 ANKRD33BA6NCL7 494 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 NCF1BA6NI72 391 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 NCF1CA8MVU1 366 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 H0Y3Z8 333 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 GNB5O14775 395 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 OR10H2O60403 315 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 IFNA2P01563 188 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 NID1P14543 1247 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 NCF1P14598 390 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 ATP5A1P25705 553 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 PTH2RP49190 550 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 NAGLUP54802 743 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 RPS6KA2Q15349 733 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 AP5B1Q2VPB7 878 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF793Q6ZN11 406 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 C20orf204Q6ZNR8 217 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 SNX31Q8N9S9 440 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZFP3Q96NJ6 502 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 WFIKKN1Q96NZ8 548 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 FAM111AQ96PZ2 611 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 TUBA1CQ9BQE3 449 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 UBQLN3Q9H347 655 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 TEX10Q9NXF1 929 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 OARD1Q9Y530 152 aa17.3■□□□□ 0.36
NCKIPSD-209ENST00000470006 MED12LQ86YW9 2145 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 SMNDC1O75940 238 aaKnown RBP eCLIP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 RCBTB2O95199 551 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 ALOX15P16050 662 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 PTMSP20962 102 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 SSR2P43308 183 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 MAGEA3P43357 314 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 RPP38P78345 283 aaKnown RBP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 CDKL1Q00532 357 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 BIKQ13323 160 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 HIST2H2ACQ16777 129 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 HLA-DQA1Q5Y7H0 255 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 HIST2H2AA3Q6FI13 130 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 PODNL1Q6PEZ8 512 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 PLXDC2Q6UX71 529 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 NTNG2Q96CW9 530 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 ACBD3Q9H3P7 528 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 RPF2Q9H7B2 306 aaKnown RBP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 CTNNAL1Q9UBT7 734 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 PACSIN3Q9UKS6 424 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF490Q9ULM2 529 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
NCKIPSD-209ENST00000470006 C2orf92A0A1B0GVN3 265 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 A8MXE2 369 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 DEFB108AA8MXU0 73 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 ACTL6AO96019 429 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 SOX18P35713 384 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF75DP51815 510 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 FAM27E3Q08E93 113 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 GAB1Q13480 694 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 SETDB1Q15047 1291 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 KBTBD12Q3ZCT8 623 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 SPANXN3Q5MJ09 141 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 UBE3DQ7Z6J8 389 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 NKAPQ8N5F7 415 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 BBOF1Q8ND07 529 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 FAM83FQ8NEG4 500 aaPredicted RBP17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 SPPL2AQ8TCT8 520 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms