RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KCNAB1Q14722 419 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 NR1D2Q14995 579 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 NDUFA9Q16795 377 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 SWT1Q5T5J6 900 aaKnown RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 PEAR1Q5VY43 1037 aaPredicted RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 SAMD14Q8IZD0 417 aaPredicted RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 TMEM52Q8NDY8 209 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 OR5D16Q8NGK9 328 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 KAT2AQ92830 837 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 CCDC74AQ96AQ1 378 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 TBC1D20Q96BZ9 403 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 NPLQ9BXD5 320 aaPredicted RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 OR51I1Q9H343 314 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 GAREM1Q9H706 876 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 ANKRA2Q9H9E1 313 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 TRPC4Q9UBN4 977 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 PATE3B3GLJ2 98 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 C5orf58C9J3I9 102 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 UPK1AO00322 258 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 CYR61O00622 381 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 LDB3O75112 727 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 PRSS23O95084 383 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 FHP07954 510 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MATN1P21941 496 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 HSPA13P48723 471 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 PRR5P85299 388 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 LASP1Q14847 261 aaKnown RBP17.06■□□□□ 0.32
SMC4-211ENST00000469858 BHLHB9Q6PI77 547 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 SLC38A5Q8WUX1 472 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 ELP4Q96EB1 424 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 OTUB1Q96FW1 271 aaPredicted RBP17.06■□□□□ 0.32
SMC4-211ENST00000469858 ZNF597Q96LX8 424 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 ZNF285Q96NJ3 590 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 A4GALTQ9NPC4 353 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 PRDM9Q9NQV7 894 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 AP4B1Q9Y6B7 739 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 M0QX08 132 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 EI24O14681 340 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 SEMG1P04279 462 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 OR12D1P0DN82 309 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 CD1CP29017 333 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MAGEA2P43356 314 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 ARL4DP49703 201 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 RAB38P57729 211 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MED21Q13503 144 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 RPS26P11Q5JNZ5 115 aaPredicted RBP17.06■□□□□ 0.32
SMC4-211ENST00000469858 C6orf52Q5T4I8 152 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 REEP3Q6NUK4 255 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 CCDC80Q76M96 950 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 SPRED1Q7Z699 444 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 SLC30A8Q8IWU4 369 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 PACRGLQ8N7B6 248 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 OR56A1Q8NGH5 318 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 OR2I1PQ8NGU4 316 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 OR4C6Q8NH72 309 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 TAMM41Q96BW9 452 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MOAP1Q96BY2 351 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 YIPF4Q9BSR8 244 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 CHRNA10Q9GZZ6 450 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 C3orf14Q9HBI5 128 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 IL1RAPQ9NPH3 570 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 HCN3Q9P1Z3 774 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 RAB26Q9ULW5 256 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MYO15AQ9UKN7 3530 aa17.06■□□□□ 0.32
SMC4-211ENST00000469858 MYOCOSA0A1B0GUC4 107 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 HYKKA2RU49 373 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 A8MU76 341 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 H0YJX3 145 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 hCG_2039718K7EN88 272 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 EMC8O43402 210 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 FOXS1O43638 330 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 FGF17O60258 216 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 RASAL1O95294 804 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 HMGN2P05204 90 aaKnown RBP17.05■□□□□ 0.32
SMC4-211ENST00000469858 FABP3P05413 133 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 CPMP14384 443 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 KHKP50053 298 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 IST1P53990 364 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 PCBP3P57721 371 aaKnown RBP17.05■□□□□ 0.32
SMC4-211ENST00000469858 MRPS35P82673 323 aaKnown RBP17.05■□□□□ 0.32
SMC4-211ENST00000469858 VLDLRP98155 873 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 NUP43Q8NFH3 380 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 DOHHQ9BU89 302 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 RBCK1Q9BYM8 510 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 SPRTNQ9H040 489 aaPredicted RBP17.05■□□□□ 0.32
SMC4-211ENST00000469858 Q9H521 79 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 EQTNQ9NQ60 294 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 RAB23Q9ULC3 237 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 ABCG2Q9UNQ0 655 aa17.05■□□□□ 0.32
SMC4-211ENST00000469858 MN1Q10571 1320 aaPredicted RBP17.05■□□□□ 0.32
SMC4-211ENST00000469858 CPED1A4D0V7 1026 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 CHST10O43529 356 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 PORP16435 677 aaPredicted RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 SKP1P63208 163 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 SELENOWP63302 87 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 KCNJ10P78508 379 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms