RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FRG2Q64ET8 278 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 OR52E8Q6IFG1 317 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 CYP20A1Q6UW02 462 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 FAM47EQ6ZV65 393 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 ZNF295-AS1Q8N0V1 137 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 FAM109AQ8N4B1 249 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 TMEM251Q8N6I4 163 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 MNS1Q8NEH6 495 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 SLC22A8Q8TCC7 542 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 PHF21BQ96EK2 531 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 FRG2BQ96QU4 278 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 TREX2Q9BQ50 279 aaPredicted RBP15.05■□□□□ -0
COL9A3-208ENST00000469802 C1QTNF3Q9BXJ4 246 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 ERVK-6Q9BXR3 956 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 WWTR1Q9GZV5 400 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 DEFB127Q9H1M4 99 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.05■□□□□ -02e-6■■■□□ 15.8
COL9A3-208ENST00000469802 TEX10Q9NXF1 929 aaPredicted RBP15.05■□□□□ -0
COL9A3-208ENST00000469802 TUBA8Q9NY65 449 aaPredicted RBP15.05■□□□□ -0
COL9A3-208ENST00000469802 ERVK-19Q9WJR5 959 aa15.05■□□□□ -0
COL9A3-208ENST00000469802 INTS1Q8N201 2190 aaKnown RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 A0A1B0GTL3 188 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 A0A1B0GVC2 190 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 A0A1W2PS29 197 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 OR14I1A6ND48 311 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 TRIM49D1C9J1S8 452 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 PDE9AO76083 593 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 SLC35E2P0CK97 266 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 MAGEA5P43359 124 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 DNASE1L1P49184 302 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 PAOXQ6QHF9 649 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 DND1Q8IYX4 353 aaKnown RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 RPRMLQ8N4K4 120 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 TMEM151AQ8N4L1 468 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 ZNF441Q8N8Z8 693 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 PAQR8Q8TEZ7 354 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 ZNF483Q8TF39 744 aaPredicted RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 IFT81Q8WYA0 676 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 UCN3Q969E3 161 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 SDCCAG3Q96C92 435 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 MRPL57Q9BQC6 102 aaKnown RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 CNPPD1Q9BV87 410 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 ENKD1Q9H0I2 346 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 WDR41Q9HAD4 459 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 ADAM29Q9UKF5 820 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 CHCHD2Q9Y6H1 151 aaPredicted RBP15.04■□□□□ -0
COL9A3-208ENST00000469802 IKBKGQ9Y6K9 419 aa15.04■□□□□ -0
COL9A3-208ENST00000469802 A0A087WUV0 522 aaPredicted RBP15.03■□□□□ -0
COL9A3-208ENST00000469802 OR6C76A6NM76 312 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 A8MT66 165 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 OR10H2O60403 315 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 SMIM24O75264 130 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 GBAP04062 536 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 P04436 131 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 SNRPB2P08579 225 aaKnown RBP15.03■□□□□ -0
COL9A3-208ENST00000469802 ABHD2P08910 425 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 FBXO45P0C2W1 286 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 CTAGE8P0CG41 777 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 TMEM211Q6ICI0 200 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 RNF111Q6ZNA4 994 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 TRILQ7L0X0 811 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 CTAGE4Q8IX94 777 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 OR4F6Q8NGB9 312 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 DOK4Q8TEW6 326 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 RIT1Q92963 219 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 ATP6V1E2Q96A05 226 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 GAL3ST4Q96RP7 486 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 SMC6Q96SB8 1091 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 SPOCK3Q9BQ16 436 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 MRPL1Q9BYD6 325 aaKnown RBP15.03■□□□□ -0
COL9A3-208ENST00000469802 ZNF703Q9H7S9 590 aaPredicted RBP15.03■□□□□ -0
COL9A3-208ENST00000469802 CXorf21Q9HAI6 301 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 PROK2Q9HC23 129 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 SEMA4BQ9NPR2 832 aaPredicted RBP15.03■□□□□ -0
COL9A3-208ENST00000469802 COQ3Q9NZJ6 369 aa15.03■□□□□ -0
COL9A3-208ENST00000469802 IQANK1A0A1B0GTG1 560 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 LRRC3CA6NJW4 275 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 POC1B-GALNT4F8VUJ3 575 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 AQP7O14520 342 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 PGRMC2O15173 223 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 CELA3AP09093 270 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 IGFBP2P18065 325 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 GCAP28676 217 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 PIGAP37287 484 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 ARL1P40616 181 aaPredicted RBP15.02■□□□□ -0
COL9A3-208ENST00000469802 TBL3Q12788 808 aaKnown RBP15.02■□□□□ -0
COL9A3-208ENST00000469802 ZNF267Q14586 743 aaPredicted RBP15.02■□□□□ -0
COL9A3-208ENST00000469802 SLC22A10Q63ZE4 541 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 LETMD1Q6P1Q0 360 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 RPS27LQ71UM5 84 aaKnown RBP15.02■□□□□ -0
COL9A3-208ENST00000469802 SLC29A4Q7RTT9 530 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 MYRIPQ8NFW9 859 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 OR10G3Q8NGC4 313 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 CA5BP1Q8WTZ4 195 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 ZNF592Q92610 1267 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 PNPLA3Q9NST1 481 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 ZNF225Q9UK10 706 aa15.02■□□□□ -0
COL9A3-208ENST00000469802 RNF6Q9Y252 685 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms