RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 NT5DC2Q9H857 520 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 IRAK4Q9NWZ3 460 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 SEC14L3Q9UDX4 400 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 DNMT3AQ9Y6K1 912 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 ARRDC5A6NEK1 342 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 HAT1O14929 419 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 PGRMC2O15173 223 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 OR10H3O60404 316 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 TPST2O60704 377 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 MAT2AP31153 395 aaKnown RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 PRKAG1P54619 331 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 OXA1LQ15070 435 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 TRIM16LQ309B1 348 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 UAP1L1Q3KQV9 507 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 BCDIN3DQ7Z5W3 292 aaKnown RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 SLC35G5Q96KT7 338 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 ZNF354BQ96LW1 612 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 MVB12BQ9H7P6 319 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 POLE4Q9NR33 117 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 SEMA3GQ9NS98 782 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 ZCCHC3Q9NUD5 404 aaKnown RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 GDE1Q9NZC3 331 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 TRPC4Q9UBN4 977 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
CBWD3-205ENST00000469687 F5P12259 2224 aa13.89□□□□□ -0.19
CBWD3-205ENST00000469687 DSCR3O14972 297 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ENTPD6O75354 484 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 NME6O75414 186 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 CLEC3AO75596 197 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ERAL1O75616 437 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 CEACAM5P06731 702 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 C8orf89P0DMQ9 161 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 DBTP11182 482 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 PEBP1P30086 187 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 PKLRP30613 574 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 GPC1P35052 558 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TIE1P35590 1138 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 NCBP2P52298 156 aaKnown RBP eCLIP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TEKQ02763 1124 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 DMPKQ09013 629 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 DNASE1L3Q13609 305 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 DCST1Q5T197 706 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 LSRQ86X29 649 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 PSMA8Q8TAA3 256 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 SLC7A13Q8TCU3 470 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 MROQ9BYG7 248 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 MKRN2Q9H000 416 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ANKRA2Q9H9E1 313 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ACSS1Q9NUB1 689 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 SPHK1Q9NYA1 384 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 SCHIP1Q9P0W5 487 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ZW10O43264 779 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ERI3O43414 337 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 EPPINO95925 133 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ADAP00813 363 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 H1F0P07305 194 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 SERPINB1P30740 379 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 RGS6P49758 472 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 RAB15P59190 212 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 FUT5Q11128 374 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 MED22Q15528 200 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 C9orf50Q5SZB4 431 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 NIPAL1Q6NVV3 410 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 LINC00299Q6ZSB3 139 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 NATD1Q8N6N6 113 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 BTBD1Q9H0C5 482 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 MRPS30Q9NP92 439 aaKnown RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 SLC35C2Q9NQQ7 365 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 CTPS2Q9NRF8 586 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 PHPT1Q9NRX4 125 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-205ENST00000469687 OBP2AQ9NY56 170 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 DNAJC27Q9NZQ0 273 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 TMCC3Q9ULS5 477 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 A4GNTQ9UNA3 340 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 IFT52Q9Y366 437 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 GPSM3Q9Y4H4 160 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 ATG4BQ9Y4P1 393 aa13.88□□□□□ -0.19
CBWD3-205ENST00000469687 A0A1W2PR48 441 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 METTL15A6NJ78 407 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 PDZK1P1A8MUH7 402 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 TLR4O00206 839 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 MAN2B1O00754 1011 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 NARSO43776 548 aaKnown RBP13.87□□□□□ -0.19
CBWD3-205ENST00000469687 RPLP0P05388 317 aaKnown RBP13.87□□□□□ -0.19
CBWD3-205ENST00000469687 NR2F1P10589 423 aa13.87□□□□□ -0.19
CBWD3-205ENST00000469687 OSMP13725 252 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms