RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 IER3P46695 156 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 FKBP1BP68106 108 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 LRRC63Q05C16 580 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 MEF2DQ14814 521 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 KCTD19Q17RG1 926 aaPredicted RBP1.9□□□□□ -2.11
SSB-208ENST00000468600 UNC50Q53HI1 259 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 C1orf189Q5VU69 101 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 TGIF2LYQ8IUE0 185 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 FBXW8Q8N3Y1 598 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 SNRNP40Q96DI7 357 aaKnown RBP1.9□□□□□ -2.11
SSB-208ENST00000468600 SLF1Q9BQI6 1058 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 MIEF1Q9NQG6 463 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 HPS4Q9NQG7 708 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 DPM3Q9P2X0 92 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 SEC14L4Q9UDX3 406 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 PRODH2Q9UF12 536 aa1.9□□□□□ -2.11
SSB-208ENST00000468600 IGLV3-16A0A075B6K0 115 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 FAM86B1E9PN63 330 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 FAM86B2P0C5J1 330 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 AKR1B1P15121 316 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 CASP2P42575 452 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 TRPC1P48995 793 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 SLC10A1Q14973 349 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 PSMD6Q15008 389 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 KRT31Q15323 416 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 PAGE2BQ5JRK9 111 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 OTOAQ7RTW8 1153 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 SMYD1Q8NB12 490 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 MRPL24Q96A35 216 aaKnown RBP1.89□□□□□ -2.11
SSB-208ENST00000468600 STARD4Q96DR4 205 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 SGF29Q96ES7 293 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 C19orf43Q9BQ61 176 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 ATG101Q9BSB4 218 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 MINDY3Q9H8M7 445 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 Q9HAA7 133 aa1.89□□□□□ -2.11
SSB-208ENST00000468600 MRPL17Q9NRX2 175 aaKnown RBP1.89□□□□□ -2.11
SSB-208ENST00000468600 EIF3KQ9UBQ5 218 aaKnown RBP1.89□□□□□ -2.11
SSB-208ENST00000468600 TRABD2BA6NFA1 517 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 RTN2O75298 545 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 GBAP04062 536 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 PDGFRAP16234 1089 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 OR1D2P34982 312 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 NPBWR1P48145 328 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ZNF131P52739 623 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ZNF33BQ06732 778 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 KCTD2Q14681 263 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 SGCBQ16585 318 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 TWISTNBQ3B726 338 aaPredicted RBP1.88□□□□□ -2.11
SSB-208ENST00000468600 ACER2Q5QJU3 275 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 PM20D1Q6GTS8 502 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 RHBDD2Q6NTF9 364 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 CFAP161Q6P656 301 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 CCDC186Q7Z3E2 898 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 C4orf19Q8IY42 314 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ZNF561Q8N587 486 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ADAMTS16Q8TE57 1224 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 C9orf85Q96MD7 179 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 C17orf62Q9BQA9 187 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 RABEP2Q9H5N1 569 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 PLEK2Q9NYT0 353 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 NEU3Q9UQ49 428 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ASTN1O14525 1302 aa1.88□□□□□ -2.11
SSB-208ENST00000468600 ERVV-1B6SEH8 477 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 SYT7O43581 403 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 LETM1O95202 739 aaPredicted RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 NUDT14O95848 222 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 RPN1P04843 607 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 VIMP08670 466 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 CT45A10P0DMU9 189 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 PVRP15151 417 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 IGFBP5P24593 272 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 GJB2P29033 226 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 MTIF2P46199 727 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 PPOXP50336 477 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 ARHGDIBP52566 201 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 SLC3A1Q07837 685 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 CAMK2DQ13557 499 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 SNRNP48Q6IEG0 339 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 TFAP2EQ6VUC0 442 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 SPATA21Q7Z572 469 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 ERI1Q8IV48 349 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 TPRX1Q8N7U7 411 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 CKAP2Q8WWK9 683 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 PCED1BQ96HM7 432 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 CAPNS2Q96L46 248 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 FER1L6-AS2Q96M78 137 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 FAM129AQ9BZQ8 928 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 TRIM9Q9C026 710 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 RNF41Q9H4P4 317 aaPredicted RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 PATZ1Q9HBE1 687 aaKnown RBP1.87□□□□□ -2.11
SSB-208ENST00000468600 TAS2R16Q9NYV7 291 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 FGD5Q6ZNL6 1462 aa1.87□□□□□ -2.11
SSB-208ENST00000468600 HTR3EA5X5Y0 456 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 ANXA9O76027 345 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 IGHV3-23P01764 117 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 UGT1A6P19224 532 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 PTAFRP25105 342 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 DIO3P55073 304 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 GABPAQ06546 454 aa1.86□□□□□ -2.11
SSB-208ENST00000468600 MPPED2Q15777 294 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms