RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ZNF267Q14586 743 aaPredicted RBP22.56■■□□□ 1.2
PTCH1-210ENST00000468211 SPRED3Q2MJR0 410 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 TECRLQ5HYJ1 363 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 PRAMEF20Q5VT98 475 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 SLC22A10Q63ZE4 541 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 ACAD11Q709F0 780 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 CCDC91Q7Z6B0 441 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 L3MBTL4Q8NA19 623 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 C7orf57Q8NEG2 295 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 SLC22A8Q8TCC7 542 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 PAQR8Q8TEZ7 354 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 GAL3ST4Q96RP7 486 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 TTYH2Q9BSA4 534 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 LYARQ9NX58 379 aaKnown RBP22.56■■□□□ 1.2
PTCH1-210ENST00000468211 NINJ2Q9NZG7 142 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 SPRR3Q9UBC9 169 aa22.56■■□□□ 1.2
PTCH1-210ENST00000468211 CCDC189A1A4V9 331 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 AQP7O14520 342 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 OR7A17O14581 309 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 BCKDKO14874 412 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 UGDHO60701 494 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 LRATO95237 230 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 GLI4P10075 376 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 MSX1P28360 303 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 TYK2P29597 1187 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 BUD31P41223 144 aaPredicted RBP22.55■■□□□ 1.2
PTCH1-210ENST00000468211 SLC37A1P57057 533 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 CUL3Q13618 768 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 SLC10A1Q14973 349 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 OR10G3Q8NGC4 313 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 OR52B6Q8NGF0 335 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 ART5Q96L15 291 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 WWTR1Q9GZV5 400 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 VPS11Q9H270 941 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 KCNJ16Q9NPI9 418 aa22.55■■□□□ 1.2
PTCH1-210ENST00000468211 CHCHD2Q9Y6H1 151 aaPredicted RBP22.55■■□□□ 1.2
PTCH1-210ENST00000468211 LRRC3CA6NJW4 275 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 PGRMC2O15173 223 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 DYRK3O43781 588 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 SUSD5O60279 629 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 NR2F6P10588 404 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 MAN2A2P49641 1150 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 SERPINB8P50452 374 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 EBPQ15125 230 aaKnown RBP22.54■■□□□ 1.2
PTCH1-210ENST00000468211 CYP20A1Q6UW02 462 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 TMEM64Q6YI46 380 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 RNF111Q6ZNA4 994 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 SLC15A4Q8N697 577 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 PTGR2Q8N8N7 351 aaPredicted RBP22.54■■□□□ 1.2
PTCH1-210ENST00000468211 RIT1Q92963 219 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 REPS1Q96D71 796 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 ACSS3Q9H6R3 686 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 LDAHQ9H6V9 325 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 ZNF703Q9H7S9 590 aaPredicted RBP22.54■■□□□ 1.2
PTCH1-210ENST00000468211 NOL11Q9H8H0 719 aaKnown RBP22.54■■□□□ 1.2
PTCH1-210ENST00000468211 TEX10Q9NXF1 929 aaPredicted RBP22.54■■□□□ 1.2
PTCH1-210ENST00000468211 SPG11Q96JI7 2443 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 MED13LQ71F56 2210 aa22.54■■□□□ 1.2
PTCH1-210ENST00000468211 IQANK1A0A1B0GTG1 560 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 FOXE1O00358 373 aaPredicted RBP22.53■■□□□ 1.2
PTCH1-210ENST00000468211 OR10H2O60403 315 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 FBXO45P0C2W1 286 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 SSTR4P31391 388 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 PHEXP78562 749 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 C8orf74Q6P047 294 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 LIX1LQ8IVB5 337 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 FBXW8Q8N3Y1 598 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 FAM13CQ8NE31 585 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 OR10Q1Q8NGQ4 319 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 NSUN5Q96P11 429 aaKnown RBP22.53■■□□□ 1.2
PTCH1-210ENST00000468211 PSD3Q9NYI0 1048 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 ACAD8Q9UKU7 415 aa22.53■■□□□ 1.2
PTCH1-210ENST00000468211 CNOT11Q9UKZ1 510 aaKnown RBP22.53■■□□□ 1.2
PTCH1-210ENST00000468211 TNPO3Q9Y5L0 923 aaKnown RBP22.53■■□□□ 1.2
PTCH1-210ENST00000468211 TRGV5A0A0B4J1U4 118 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 A0A0G2JNJ9 132 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 FIGNL2A6NMB9 653 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 CLDN9O95484 217 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 CAPN3P20807 821 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 ADH7P40394 386 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 KCNJ2P63252 427 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 FAM219BQ5XKK7 198 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 KLC3Q6P597 504 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 B3GNT6Q6ZMB0 384 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 SLC29A4Q7RTT9 530 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 CDH24Q86UP0 819 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 NUDT13Q86X67 352 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 DMRTC2Q8IXT2 367 aaPredicted RBP22.52■■□□□ 1.2
PTCH1-210ENST00000468211 PHF21BQ96EK2 531 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 PELOQ9BRX2 385 aaKnown RBP22.52■■□□□ 1.2
PTCH1-210ENST00000468211 ZBTB26Q9HCK0 441 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 ZFP64Q9NPA5 681 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.52■■□□□ 1.2
PTCH1-210ENST00000468211 Q9UFV3 132 aa22.52■■□□□ 1.2
PTCH1-210ENST00000468211 HCN1O60741 890 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 CT62P0C5K7 136 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 SLC35E2P0CK97 266 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 MAGEA12P43365 314 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 TESK1Q15569 626 aa22.51■■□□□ 1.19
PTCH1-210ENST00000468211 LRRC25Q8N386 305 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms