RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CAV1Q03135 178 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 MROH9Q5TGP6 573 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 LIPJQ5W064 366 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 ZDHHC24Q6UX98 284 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 SPNS3Q6ZMD2 512 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 LIX1LQ8IVB5 337 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 CLYBLQ8N0X4 340 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 FBXW8Q8N3Y1 598 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 SLC15A4Q8N697 577 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 OR10G3Q8NGC4 313 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 JSRP1Q96MG2 331 aaPredicted RBP19.4■□□□□ 0.7
COL9A3-207ENST00000467819 PELOQ9BRX2 385 aaKnown RBP19.4■□□□□ 0.7
COL9A3-207ENST00000467819 ZNF717Q9BY31 904 aaPredicted RBP19.4■□□□□ 0.7
COL9A3-207ENST00000467819 WWTR1Q9GZV5 400 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 RAB17Q9H0T7 212 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 ZFP64Q9NPA5 681 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 LYARQ9NX58 379 aaKnown RBP19.4■□□□□ 0.7
COL9A3-207ENST00000467819 ANKHD1Q8IWZ3 2542 aaKnown RBP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 A0A087X1B8 175 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 PROM1O43490 865 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 TMPRSS11DO60235 418 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 GPR75O95800 540 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 NR2F6P10588 404 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 PTX3P26022 381 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 EBPQ15125 230 aaKnown RBP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 CPSF6Q16630 551 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 FAM83EQ2M2I3 478 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 SPRED3Q2MJR0 410 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 CES4AQ5XG92 561 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 CYP20A1Q6UW02 462 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 RHEBL1Q8TAI7 183 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 REPS1Q96D71 796 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 SLC6A15Q9H2J7 730 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 PROK2Q9HC23 129 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 CPSF2Q9P2I0 782 aaKnown RBP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 TSC22D4Q9Y3Q8 395 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 ASB4Q9Y574 426 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 CHCHD2Q9Y6H1 151 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-207ENST00000467819 ZFHX3Q15911 3703 aa19.39■□□□□ 0.69
COL9A3-207ENST00000467819 ITPR3Q14573 2671 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 A0A0A6YYD5 115 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 A0A1W2PR48 441 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 LRRC3CA6NJW4 275 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 C2P06681 752 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 FBXO45P0C2W1 286 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 FAM58BPP0C7Q3 252 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 SERPINB3P29508 390 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 BSGP35613 385 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 PIK3CGP48736 1102 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 TRPC1P48995 793 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 SLC37A1P57057 533 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 TBL3Q12788 808 aaKnown RBP19.38■□□□□ 0.69
COL9A3-207ENST00000467819 GTF2H2Q13888 395 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 UAP1Q16222 522 aaPredicted RBP19.38■□□□□ 0.69
COL9A3-207ENST00000467819 MRM1Q6IN84 353 aaKnown RBP19.38■□□□□ 0.69
COL9A3-207ENST00000467819 GTF2H2CQ6P1K8 395 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 GOLGA7Q7Z5G4 137 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 WDR53Q7Z5U6 358 aaPredicted RBP19.38■□□□□ 0.69
COL9A3-207ENST00000467819 RIT1Q92963 219 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 UCN3Q969E3 161 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 WDR41Q9HAD4 459 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 SNX15Q9NRS6 342 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 CNIH4Q9P003 139 aa19.38■□□□□ 0.69
COL9A3-207ENST00000467819 H0YIV9 168 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 ZWINTO95229 277 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 SIX3O95343 332 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 AIFM1O95831 613 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 GBAP04062 536 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 ARL1P40616 181 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 NEK2P51955 445 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 ARFIP1P53367 373 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 ALDH18A1P54886 795 aaKnown RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 DLX5P56178 289 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 TMEM64Q6YI46 380 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 DND1Q8IYX4 353 aaKnown RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 LRRC25Q8N386 305 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 LIX1Q8N485 282 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 NRGNQ92686 78 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 DOHHQ9BU89 302 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 DDX31Q9H8H2 851 aaKnown RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 IPPKQ9H8X2 491 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 SLC24A3Q9HC58 644 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 CNOT11Q9UKZ1 510 aaKnown RBP19.37■□□□□ 0.69
COL9A3-207ENST00000467819 RNF11Q9Y3C5 154 aa19.37■□□□□ 0.69
COL9A3-207ENST00000467819 A0A096LPK6 155 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 A0A1W2PS29 197 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 HMX2A2RU54 273 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 OR6C76A6NM76 312 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 UGDHO60701 494 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 CLPSP04118 112 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 GABRA1P14867 456 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 GDF1P27539 372 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 SSTR4P31391 388 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 CASQ1P31415 396 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 ART1P52961 327 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 CUL3Q13618 768 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 ACAP2Q15057 778 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 PCBP2Q15366 365 aaKnown RBP eCLIP19.36■□□□□ 0.692e-6■■■■□ 23.8
COL9A3-207ENST00000467819 NTRK2Q16620 822 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 SLC25A35Q3KQZ1 300 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms