RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 IL23RQ5VWK5 629 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 FAM159AQ6UWV7 190 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 MCM10Q7L590 875 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 KCNMB4Q86W47 210 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 BANPQ8N9N5 519 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 OR1B1Q8NGR6 318 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 PNPLA2Q96AD5 504 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 TAAR6Q96RI8 345 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 TNFRSF13CQ96RJ3 184 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 PSMB7Q99436 277 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 RBM4BQ9BQ04 359 aaKnown RBP4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 LRRC61Q9BV99 259 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 CXXC4Q9H2H0 198 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 GTSE1Q9NYZ3 720 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 NDUFA13Q9P0J0 144 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 THAP10Q9P2Z0 257 aaPredicted RBP4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 SPASTQ9UBP0 616 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 MUTYHQ9UIF7 546 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 RARRES3Q9UL19 164 aa4.17□□□□□ -1.74
GAPVD1-211ENST00000467707 TRBV5-4A0A0C4DH59 114 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 SH3PXD2BA1X283 911 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 RNF212BA8MTL3 300 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 A8MXK9 166 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 EPM2AB3EWF7 344 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 PDHXO00330 501 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 FRAT2O75474 233 aaPredicted RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 OR6B1O95007 311 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 REC8O95072 547 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 PTMAP06454 111 aaKnown RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 PEX3P56589 373 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 BPIFB3P59826 476 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 RPS27AP62979 156 aaKnown RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 SNX1Q13596 522 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 POM121L1PQ3SYA9 428 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 CMPK2Q5EBM0 449 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 LIPJQ5W064 366 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 OR6B2Q6IFH4 312 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 DOK6Q6PKX4 331 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 WDR88Q6ZMY6 472 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 NUFIP2Q7Z417 695 aaKnown RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 YRDCQ86U90 279 aaKnown RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 CATSPER3Q86XQ3 398 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 LMNTD2Q8IXW0 634 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 LRRC17Q8N6Y2 441 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 OR1K1Q8NGR3 316 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 DQX1Q8TE96 717 aaKnown RBP4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 TMEM37Q8WXS4 190 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 P3H4Q92791 437 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 C16orf58Q96GQ5 468 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 COG3Q96JB2 828 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 RCHY1Q96PM5 261 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 NMNAT2Q9BZQ4 307 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 TRIM15Q9C019 465 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 KRT23Q9C075 422 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 SIRPDQ9H106 197 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 DCTPP1Q9H773 170 aa4.16□□□□□ -1.74
GAPVD1-211ENST00000467707 NPC1L1Q9UHC9 1359 aa4.15□□□□□ -1.74
GAPVD1-211ENST00000467707 TRGV8A0A0C4DH27 118 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CFLARO15519 480 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF749O43361 778 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 STAM2O75886 525 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 POP4O95707 220 aaKnown RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CALCAP01258 141 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 RALAP11233 206 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 GP9P14770 177 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 GNSP15586 552 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CCNA2P20248 432 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CCND2P30279 289 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 MATKP42679 507 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 MTIF2P46199 727 aaKnown RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF131P52739 623 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 INAQ16352 499 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 DCAF12Q5T6F0 453 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 AGAP7PQ5VUJ5 663 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 BNIPLQ7Z465 357 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ADCK1Q86TW2 530 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 VPS36Q86VN1 386 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 RANBP3LQ86VV4 465 aaPredicted RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 RNF148Q8N7C7 305 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF781Q8N8C0 355 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 MLKLQ8NB16 471 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 FAM71CQ8NEG0 241 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 NABP1Q96AH0 204 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 TMEM45BQ96B21 275 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF689Q96CS4 500 aaPredicted RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 SAMD8Q96LT4 415 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF599Q96NL3 588 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 JPH2Q9BR39 696 aaPredicted RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 NT5DC2Q9H857 520 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 SLC25A19Q9HC21 320 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 CTSZQ9UBR2 303 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 LHX3Q9UBR4 397 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 BCAP29Q9UHQ4 241 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 ZNF490Q9ULM2 529 aaPredicted RBP4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 MGAT4AQ9UM21 535 aa4.15□□□□□ -1.75
GAPVD1-211ENST00000467707 SPATA2Q9UM82 520 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms