RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 DOHHQ9BU89 302 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 G6PC3Q9BUM1 346 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 EFCAB11Q9BUY7 163 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 ZNF717Q9BY31 904 aaPredicted RBP11.14□□□□□ -0.63
UBR4-211ENST00000467272 DERL2Q9GZP9 239 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 POPDC3Q9HBV1 291 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 DNAJC11Q9NVH1 559 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 MOCS1Q9NZB8 636 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 PTBP2Q9UKA9 531 aaKnown RBP11.14□□□□□ -0.63
UBR4-211ENST00000467272 C15orf41Q9Y2V0 281 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 NPFFR2Q9Y5X5 522 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 TEX264Q9Y6I9 313 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 ARID1AO14497 2285 aa11.14□□□□□ -0.63
UBR4-211ENST00000467272 OR6C76A6NM76 312 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 DNALI1O14645 258 aaPredicted RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 SNX4O95219 450 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 LRATO95237 230 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 ACSL3O95573 720 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 COX7A2P14406 83 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 CPN1P15169 458 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 GDF1P27539 372 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 PTPN6P29350 595 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 TGM3Q08188 693 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 SF3B4Q15427 424 aaKnown RBP eCLIP11.13□□□□□ -0.632e-8■■■■■ 28
UBR4-211ENST00000467272 Q5PR19 223 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 MRM1Q6IN84 353 aaKnown RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 TMEM81Q6P7N7 255 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 ST13P4Q8IZP2 240 aaPredicted RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 LIX1Q8N485 282 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 PPP1R14CQ8TAE6 165 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 SPPL2AQ8TCT8 520 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 TANKQ92844 425 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 TP53INP1Q96A56 240 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 ZNF597Q96LX8 424 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 RUNDC3BQ96NL0 473 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 EGFL8Q99944 293 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 COPS7BQ9H9Q2 264 aaPredicted RBP11.13□□□□□ -0.63
UBR4-211ENST00000467272 LZTFL1Q9NQ48 299 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 GALNT8Q9NY28 637 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 CTNNAL1Q9UBT7 734 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 SLC6A5Q9Y345 797 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
UBR4-211ENST00000467272 FAM95CA0A1B0GW59 222 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 DEFB108AA8MXU0 73 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 H7C1Q1 480 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ARHGEF9O43307 516 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 STK16O75716 305 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 RCBTB2O95199 551 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ALOX15P16050 662 aaPredicted RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 LOXP28300 417 aaPredicted RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 ELK3P41970 407 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 CASP3P42574 277 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 NAGLUP54802 743 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 FBXW4P57775 412 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 PLIN5Q00G26 463 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 LAPTM5Q13571 262 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 RPS6KA2Q15349 733 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 EIPR1Q53HC9 387 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 KHDRBS2Q5VWX1 349 aaKnown RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 C18orf63Q68DL7 685 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 TAOK1Q7L7X3 1001 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 GAS2L3Q86XJ1 694 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 TCAIMQ8N3R3 496 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ZCCHC7Q8N3Z6 543 aaKnown RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 PDPRQ8NCN5 879 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 FAM13CQ8NE31 585 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ADIPOR1Q96A54 375 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ESAMQ96AP7 390 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 CTHRC1Q96CG8 243 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ART5Q96L15 291 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 UBXN10Q96LJ8 280 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 RILPQ96NA2 401 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 GNRHR2Q96P88 292 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 DGAT2Q96PD7 388 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 YIPF4Q9BSR8 244 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 SFXN3Q9BWM7 321 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 RPF2Q9H7B2 306 aaKnown RBP11.12□□□□□ -0.63
UBR4-211ENST00000467272 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 21.2
UBR4-211ENST00000467272 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 WWOXQ9NZC7 414 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 TSC22D4Q9Y3Q8 395 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 ASB4Q9Y574 426 aa11.12□□□□□ -0.63
UBR4-211ENST00000467272 DOCK7Q96N67 2140 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 A8MXE2 369 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 PRKRAO75569 313 aaKnown RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 TNFSF13O75888 250 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 GPR75O95800 540 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 PAX1P15863 534 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 CPN2P22792 545 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms