RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 IGLV3-21P80748 117 aaPredicted RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 LAPTM5Q13571 262 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ZNF267Q14586 743 aaPredicted RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 TMEM35AQ53FP2 167 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 PAGE2BQ5JRK9 111 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ADNP2Q6IQ32 1131 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 CCDC137Q6PK04 289 aaKnown RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ZNF793Q6ZN11 406 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 DGAT2L6Q6ZPD8 337 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 UBE3DQ7Z6J8 389 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 C9orf106Q8NAJ2 232 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 BBOF1Q8ND07 529 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 TANKQ92844 425 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 PERPQ96FX8 193 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 RILPQ96NA2 401 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ZFP3Q96NJ6 502 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 CCL19Q99731 98 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 EFCAB11Q9BUY7 163 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 PHACTR1Q9C0D0 580 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 WWTR1Q9GZV5 400 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 CNOT10Q9H9A5 744 aaKnown RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 DNAJC11Q9NVH1 559 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 MS4A12Q9NXJ0 267 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 TRPS1Q9UHF7 1281 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 ADAM21Q9UKJ8 722 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 C15orf41Q9Y2V0 281 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 TRIM64A6NGJ6 449 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 TRIM64BA6NI03 449 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 RTCAO00442 366 aaKnown RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 OR10H2O60403 315 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ACTL6AO96019 429 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ALOX15P16050 662 aaPredicted RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 TLX1P31314 330 aaPredicted RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 SSR2P43308 183 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 HERVK_113P63132 956 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ERVK-8P63133 956 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 EEF1A1P68104 462 aaKnown RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 FOXF2Q12947 444 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 CBLBQ13191 982 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 DOC2AQ14183 400 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 RPS6KA2Q15349 733 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 TSNQ15631 228 aaKnown RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ACKR1Q16570 336 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 EIPR1Q53HC9 387 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 WIPI1Q5MNZ9 446 aaPredicted RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 EEF1A1P5Q5VTE0 462 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 VPS39Q96JC1 886 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 SECISBP2Q96T21 854 aaKnown RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 PELOQ9BRX2 385 aaKnown RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ERVK-6Q9BXR3 956 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ANGPTL4Q9BY76 406 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 UBQLN3Q9H347 655 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 PIGMQ9H3S5 423 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 UBTD1Q9HAC8 227 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 C6orf203Q9P0P8 240 aaPredicted RBP13.22□□□□□ -0.29
SMC1A-204ENST00000463684 ERVK-19Q9WJR5 959 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 MPDZO75970 2070 aa13.22□□□□□ -0.29
SMC1A-204ENST00000463684 C2orf92A0A1B0GVN3 265 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 BANF1O75531 89 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 RCBTB2O95199 551 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 TMED10P49755 219 aaKnown RBP13.21□□□□□ -0.29
SMC1A-204ENST00000463684 NAGLUP54802 743 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 SLC37A1P57057 533 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 FBXW4P57775 412 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 PCDH1Q08174 1060 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 SLAMF1Q13291 335 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 EBPQ15125 230 aaKnown RBP13.21□□□□□ -0.29
SMC1A-204ENST00000463684 TGFBIQ15582 683 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 DCST1Q5T197 706 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 HLA-DQA1Q5Y7H0 255 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 TMEM64Q6YI46 380 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.29
SMC1A-204ENST00000463684 SPPL2AQ8TCT8 520 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 RIT1Q92963 219 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 INTS12Q96CB8 462 aaKnown RBP13.21□□□□□ -0.29
SMC1A-204ENST00000463684 LZTFL1Q9NQ48 299 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
SMC1A-204ENST00000463684 ZNF226Q9NYT6 803 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 TESMINQ9Y4I5 508 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 NPFFR2Q9Y5X5 522 aa13.21□□□□□ -0.29
SMC1A-204ENST00000463684 PRAMEF4O60810 478 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 CDH16O75309 829 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 CRLF1O75462 422 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 STK16O75716 305 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SCELO95171 688 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms