RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 DEFB127Q9H1M4 99 aa18.97■□□□□ 0.63
PDLIM4-205ENST00000463615 MRPL46Q9H2W6 279 aaKnown RBP18.97■□□□□ 0.63
PDLIM4-205ENST00000463615 DNAJC13O75165 2243 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 FBN2P35556 2912 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 A0A087WUV0 522 aaPredicted RBP18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 WASHC1A8K0Z3 465 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 TRIM49D1C9J1S8 452 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 C19orf84I3L1E1 186 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 CLPSP04118 112 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ABHD2P08910 425 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 SBK3P0C264 359 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 FBXO45P0C2W1 286 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 CCL3P10147 92 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 HERVK_113P63132 956 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ERVK-8P63133 956 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 EBPQ15125 230 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 C3P1Q6ZMU1 363 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 RNF111Q6ZNA4 994 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 TIFABQ6ZNK6 161 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 FAM47EQ6ZV65 393 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 TMEM251Q8N6I4 163 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ZNF441Q8N8Z8 693 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 TRPC4APQ8TEL6 797 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ZNF483Q8TF39 744 aaPredicted RBP18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 NSUN5Q96P11 429 aaKnown RBP18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ERVK-6Q9BXR3 956 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ENKD1Q9H0I2 346 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 AHSPQ9NZD4 102 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 COQ3Q9NZJ6 369 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 ERVK-19Q9WJR5 959 aa18.96■□□□□ 0.63
PDLIM4-205ENST00000463615 IQANK1A0A1B0GTG1 560 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 FAM166BA8MTA8 275 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 KIF2AO00139 706 aaPredicted RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SUSD5O60279 629 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 OR10H2O60403 315 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SNRPAP09012 282 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 KIR3DL1P43629 444 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 NR0B1P51843 470 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 ZNF267Q14586 743 aaPredicted RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SLC22A10Q63ZE4 541 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 TRILQ7L0X0 811 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SLC29A4Q7RTT9 530 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 PAGE2Q7Z2X7 111 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 LCA5Q86VQ0 697 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SRRM1Q8IYB3 904 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 ZNF295-AS1Q8N0V1 137 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 METTL4Q8N3J2 472 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 ASB5Q8WWX0 329 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 TP53INP1Q96A56 240 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 SDCCAG3Q96C92 435 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 CNPPD1Q9BV87 410 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 WWTR1Q9GZV5 400 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 CXorf21Q9HAI6 301 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 TUBA8Q9NY65 449 aaPredicted RBP18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 CNIH4Q9P003 139 aa18.95■□□□□ 0.62
PDLIM4-205ENST00000463615 GLOD5A6NK44 160 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 POC1B-GALNT4F8VUJ3 575 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 BCKDKO14874 412 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 PDE9AO76083 593 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 OTCP00480 354 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 SERPINB3P29508 390 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 DNASE1L1P49184 302 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 FUT7Q11130 342 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 IFT88Q13099 833 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 MILR1Q7Z6M3 343 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 CNPY4Q8N129 248 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 FBXW8Q8N3Y1 598 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 OR4F6Q8NGB9 312 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 CA5BP1Q8WTZ4 195 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 SREK1Q8WXA9 508 aaKnown RBP18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 ZNF592Q92610 1267 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 BRF2Q9HAW0 419 aa18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 TEX10Q9NXF1 929 aaPredicted RBP18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 CHCHD2Q9Y6H1 151 aaPredicted RBP18.94■□□□□ 0.62
PDLIM4-205ENST00000463615 EML6Q6ZMW3 1958 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 ANKRD33BA6NCL7 494 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 A8MT66 165 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 G3V3Y1 287 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 AQP7O14520 342 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 PGRMC2O15173 223 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 HCN1O60741 890 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 MAGEA5P43359 124 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 NTRK2Q16620 822 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 GXYLT1Q4G148 440 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 LGSNQ5TDP6 509 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 ACAD11Q709F0 780 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 TRMT10CQ7L0Y3 403 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 C17orf47Q8NEP4 570 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 LILRB4Q8NHJ6 448 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 UCN3Q969E3 161 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 MTBPQ96DY7 904 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 C14orf79Q96F83 325 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 ELOVL6Q9H5J4 265 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 PROK2Q9HC23 129 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 SEMA4BQ9NPR2 832 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 QPCTLQ9NXS2 382 aa18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-205ENST00000463615 PHF3Q92576 2039 aaKnown RBP18.92■□□□□ 0.62
PDLIM4-205ENST00000463615 A0A1B0GTL3 188 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms