RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LILRB4Q8NHJ6 448 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 NRGNQ92686 78 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CMTM7Q96FZ5 175 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PTCHD1Q96NR3 888 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 KCNC2Q96PR1 638 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MTERF1Q99551 399 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MAPKAP1Q9BPZ7 522 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 CCDC77Q9BR77 488 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 ERVK-6Q9BXR3 956 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PARD6BQ9BYG5 372 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 UCK2Q9BZX2 261 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 GSTO2Q9H4Y5 243 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 LYRM4Q9HD34 91 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 SEMA4BQ9NPR2 832 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MKS1Q9NXB0 559 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 COQ3Q9NZJ6 369 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRPS1Q9UHF7 1281 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 LGALS13Q9UHV8 139 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PPIEQ9UNP9 301 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 MMACHCQ9Y4U1 282 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
CDC42BPA-210ENST00000462553 FN1P02751 2386 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 NUP214P35658 2090 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A088AWK7 358 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A0A6YYD5 115 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 A8MUA0 341 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FOXE1O00358 373 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FCHO1O14526 889 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PLIN3O60664 434 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRMT3O60678 531 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 DIAPH2O60879 1101 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 EEDO75530 441 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRKRAO75569 313 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ITGA10O75578 1167 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 CD1EP15812 388 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TAC1P20366 129 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF10P21506 573 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PPP2R1BP30154 601 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 CHRNB4P30926 498 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 DNAJA1P31689 397 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 HPDP32754 393 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 CRHR1P34998 444 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 BSGP35613 385 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 SSR2P43308 183 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 HTR6P50406 440 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 NEK2P51955 445 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 NUP107P57740 925 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR20EP86478 221 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR20CP86479 221 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR20DP86480 221 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR20BP86481 221 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRR20AP86496 221 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TERF2Q15554 542 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TCHHL1Q5QJ38 904 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FRG2Q64ET8 278 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR4C11Q6IEV9 310 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZYG11AQ6WRX3 759 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 C16orf47Q6ZP98 133 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRABD2AQ86V40 505 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 MYLK4Q86YV6 388 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 CCDC71Q8IV32 467 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 CNPY4Q8N129 248 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 C4orf33Q8N1A6 199 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 RIBC1Q8N443 379 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 B3GNT7Q8NFL0 401 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRPC4APQ8TEL6 797 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ASB5Q8WWX0 329 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TMEM125Q96AQ2 219 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 L3HYPDHQ96EM0 354 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FAR2Q96K12 515 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FRG2BQ96QU4 278 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF382Q96SR6 550 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TBCDQ9BTW9 1192 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 DEFB126Q9BYW3 111 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 TP63Q9H3D4 680 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZDHHC11Q9H8X9 412 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 COPS7BQ9H9Q2 264 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 FARSBQ9NSD9 589 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 PSD3Q9NYI0 1048 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 ADGRE2Q9UHX3 823 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 LIPGQ9Y5X9 500 aa7.34□□□□□ -1.23
CDC42BPA-210ENST00000462553 KLRC4-KLRK1H3BQV0 150 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 PSMD12O00232 456 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 UBFD1O14562 309 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMPRSS11DO60235 418 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYO1DO94832 1006 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 GLSO94925 669 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR4F21O95013 312 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 SEMA3DO95025 777 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 OTCP00480 354 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 PDYNP01213 254 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 HOXD4P09016 255 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 CREB1P16220 341 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT15P19012 456 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT4P19013 534 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 IMPDH1P20839 514 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms