RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SLC35E2P0CK97 266 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 PIK3R1P27986 724 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GALNSP34059 522 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 HSD17B3P37058 310 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SLCO1A2P46721 670 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 KRT6CP48668 564 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 MAPK12P53778 367 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 PLGLB1Q02325 96 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GALNT1Q10472 559 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CSTF3Q12996 717 aaKnown RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 LCP2Q13094 533 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF267Q14586 743 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 MPEG1Q2M385 716 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF750Q32MQ0 723 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 UNC50Q53HI1 259 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CCNYL2Q5T2Q4 361 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 C6orf163Q5TEZ5 329 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 OPN5Q6U736 354 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 BNC2Q6ZN30 1099 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GK5Q6ZS86 529 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GPRIN3Q6ZVF9 776 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SLC29A4Q7RTT9 530 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SPPL2CQ8IUH8 684 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CHERPQ8IWX8 916 aaKnown RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GALNT12Q8IXK2 581 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 GOLM1Q8NBJ4 401 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 C16orf52Q8NHV5 167 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 RIT1Q92963 219 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 UCN3Q969E3 161 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 L3HYPDHQ96EM0 354 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SGCZQ96LD1 299 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 WWTR1Q9GZV5 400 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SMIM23A6NLE4 172 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 OR6C76A6NM76 312 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 FAM166BA8MTA8 275 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PRSS44E7EML9 344 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 MANBAO00462 879 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PRRG2O14669 202 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PGRMC2O15173 223 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 CLPSP04118 112 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 P04436 131 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 CCL3P10147 92 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 HSD3B1P14060 373 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 KRT15P19012 456 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 IMPDH1P20839 514 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 HSD3B2P26439 372 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 HMOX2P30519 316 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 HTR6P50406 440 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PRKAA2P54646 552 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 SLC37A1P57057 533 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 ADORA2A-AS1P86434 159 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 TBL3Q12788 808 aaKnown RBP9.4□□□□□ -0.9
SF3A3-204ENST00000462258 CMPK2Q5EBM0 449 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PIGGQ5H8A4 983 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 SLC48A1Q6P1K1 146 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 FAM47EQ6ZV65 393 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 FGD2Q7Z6J4 655 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 MRGPRGQ86SM5 289 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 CD163Q86VB7 1156 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF808Q8N4W9 903 aaPredicted RBP9.4□□□□□ -0.9
SF3A3-204ENST00000462258 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
SF3A3-204ENST00000462258 OR4K14Q8NGD5 310 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 EPS8L3Q8TE67 593 aaKnown RBP9.4□□□□□ -0.9
SF3A3-204ENST00000462258 AGAP11Q8TF27 550 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 SPACA9Q96E40 222 aaPredicted RBP9.4□□□□□ -0.9
SF3A3-204ENST00000462258 FAM173AQ9BQD7 235 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 GSTO2Q9H4Y5 243 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PPCSQ9HAB8 311 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 SACM1LQ9NTJ5 587 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 EMCNQ9ULC0 261 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 MEMO1Q9Y316 297 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 PCDHA9Q9Y5H5 950 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 NCKAP5O14513 1909 aa9.4□□□□□ -0.9
SF3A3-204ENST00000462258 CACNA1CQ13936 2221 aa9.4□□□□□ -0.91
SF3A3-204ENST00000462258 TEX15Q9BXT5 2789 aa9.4□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF407Q9C0G0 2248 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 A0A1B0GTH9 108 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 A0A1W2PPM1 405 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 C1orf226A1L170 272 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 GOLGA6L10A6NI86 522 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 FOXO6A8MYZ6 492 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 GUCY1B2O75343 617 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 ENO1P06733 434 aaKnown RBP9.39□□□□□ -0.91
SF3A3-204ENST00000462258 TPOP07202 933 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 FBXO45P0C2W1 286 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 CT62P0C5K7 136 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 MYL2P10916 166 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 CPMP14384 443 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 NT5EP21589 574 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 SSTR4P31391 388 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 PTGS2P35354 604 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 DNASE1L1P49184 302 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 XKP51811 444 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 PKNOX1P55347 436 aa9.39□□□□□ -0.91
SF3A3-204ENST00000462258 PPIAP62937 165 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms