RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 SCAMP1O15126 338 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 MMP20O60882 483 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 POP7O75817 140 aaKnown RBP18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 PYDC2Q56P42 97 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 ACSM5Q6NUN0 579 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 PHC2Q8IXK0 858 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 PRAP1Q96NZ9 151 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 GPA33Q99795 319 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 TMEM246Q9BRR3 403 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 TEX10Q9NXF1 929 aaPredicted RBP18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 CNOT2Q9NZN8 540 aaKnown RBP18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 KNL1Q8NG31 2342 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 CENPXA8MT69 81 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 NCR1O76036 304 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 SYN1P17600 705 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 NNMTP40261 264 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 GPR1P46091 355 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 PDE7AQ13946 482 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 PGBD2Q6P3X8 592 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 GALNT12Q8IXK2 581 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 OTULINQ96BN8 352 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 C19orf43Q9BQ61 176 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 EGLN3Q9H6Z9 239 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 SPATA7Q9P0W8 599 aa18.57■□□□□ 0.56
CNEP1R1-203ENST00000458059 SH3D21A4FU49 640 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 GPC1P35052 558 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 HMGA2P52926 109 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 PNLIPRP1P54315 467 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 GPR50Q13585 617 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 GINS1Q14691 196 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 SNAP47Q5SQN1 464 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 PRAMEF14Q5SWL7 426 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 PRAMEF13Q5VWM6 474 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TECPR1Q7Z6L1 1165 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 RASGRP3Q8IV61 690 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 C7orf57Q8NEG2 295 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TP53INP1Q96A56 240 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 ST6GAL2Q96JF0 529 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 SLC25A19Q9HC21 320 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 LSM2Q9Y333 95 aaKnown RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 OBSL1O75147 1896 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 SLC35F4A4IF30 521 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 FABP12A6NFH5 140 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 HOXC11O43248 304 aaPredicted RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 NDUFB5O43674 189 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TSPAN19P0C672 248 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 UQCRC2P22695 453 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 BUD31P41223 144 aaPredicted RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 RPS25P62851 125 aaKnown RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 KRR1Q13601 381 aaKnown RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 LARS2Q15031 903 aaKnown RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 ZNF750Q32MQ0 723 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 FLYWCH1Q4VC44 716 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 PODNL1Q6PEZ8 512 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 SLC9A6Q92581 669 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TIFAQ96CG3 184 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TMCO6Q96DC7 493 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 C11orf54Q9H0W9 315 aaPredicted RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 TXNL4BQ9NX01 149 aaKnown RBP18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 CMAHPQ9Y471 501 aa18.56■□□□□ 0.56
CNEP1R1-203ENST00000458059 ATG2BQ96BY7 2078 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 UGT2B17O75795 530 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 RAB25P57735 213 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PSPHP78330 225 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 CRTC2Q53ET0 693 aaPredicted RBP18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PDZK1Q5T2W1 519 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 CCDC80Q76M96 950 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 KRT73Q86Y46 540 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 KLK6Q92876 244 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 YME1L1Q96TA2 773 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 NELL2Q99435 816 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 MND1Q9BWT6 205 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 STUB1Q9UNE7 303 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PITPNM1O00562 1244 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PDPK1O15530 556 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 LATO43561 262 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 SNAPC1Q16533 368 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 B3GLCTQ6Y288 498 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 SLC9B2Q86UD5 537 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 LHFPL3Q86UP9 236 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 ZNF547Q8IVP9 402 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 HOMEZQ8IX15 550 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 NLGN4YQ8NFZ3 816 aaPredicted RBP18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 TREX2Q9BQ50 279 aaPredicted RBP18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PLA2G12AQ9BZM1 189 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 SRRQ9GZT4 340 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 SERHL2Q9H4I8 314 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 DOCK9Q9BZ29 2069 aa18.55■□□□□ 0.56
CNEP1R1-203ENST00000458059 PRAMEF27A3QJZ7 478 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 HMGN4O00479 90 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 CAPN5O15484 640 aaPredicted RBP18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 LZTS3O60299 673 aaPredicted RBP18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 EPHX1P07099 455 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 NR2F1P10589 423 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 SOX18P35713 384 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 ZNF33BQ06732 778 aa18.54■□□□□ 0.56
CNEP1R1-203ENST00000458059 C1DQ13901 141 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms