RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KIR2DL3P43628 341 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 IST1P53990 364 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 WDR53Q7Z5U6 358 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-220ENST00000458038 CTAGE3PQ8IX95 158 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 ULK2Q8IYT8 1036 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 HUS1BQ8NHY5 278 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 REPS1Q96D71 796 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 ATOH8Q96SQ7 321 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 CNPPD1Q9BV87 410 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 POLDIP3Q9BY77 421 aaKnown RBP19.81■□□□□ 0.76
CPNE1-220ENST00000458038 WDR41Q9HAD4 459 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 PSD3Q9NYI0 1048 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 SPRR3Q9UBC9 169 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 ANGPTL3Q9Y5C1 460 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 PLPP1O14494 284 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 DVL2O14641 736 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 TP53I11O14683 189 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 OR10H2O60403 315 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 UGDHO60701 494 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 SH3BGRLO75368 114 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 C1QAP02745 245 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 RFPL3SP0C7P2 107 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 SLC35E2BP0CK96 405 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 CD99P14209 185 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 ENDOUP21128 410 aaKnown RBP19.8■□□□□ 0.76
CPNE1-220ENST00000458038 ZNF267Q14586 743 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-220ENST00000458038 NTRK2Q16620 822 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 PRAMEF20Q5VT98 475 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 RHEBL1Q8TAI7 183 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 RIT1Q92963 219 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 DOHHQ9BU89 302 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 TMUB1Q9BVT8 246 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 WWTR1Q9GZV5 400 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 PROK2Q9HC23 129 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 DMRT3Q9NQL9 472 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 FOXD3Q9UJU5 478 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-220ENST00000458038 IKBKGQ9Y6K9 419 aa19.8■□□□□ 0.76
CPNE1-220ENST00000458038 H0YIV9 168 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 KRT38O76015 456 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 SLC37A1P57057 533 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 HERVK_113P63132 956 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 ERVK-8P63133 956 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 NAB1Q13506 487 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 CUL3Q13618 768 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 DDX39BQ13838 428 aaKnown RBP19.79■□□□□ 0.76
CPNE1-220ENST00000458038 TMEM198Q66K66 360 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 C18orf63Q68DL7 685 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 MRM1Q6IN84 353 aaKnown RBP19.79■□□□□ 0.76
CPNE1-220ENST00000458038 OR10G3Q8NGC4 313 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 TP53INP1Q96A56 240 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 ZNF597Q96LX8 424 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 GAL3ST4Q96RP7 486 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 SECISBP2Q96T21 854 aaKnown RBP19.79■□□□□ 0.76
CPNE1-220ENST00000458038 ERVK-6Q9BXR3 956 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 DDX31Q9H8H2 851 aaKnown RBP19.79■□□□□ 0.76
CPNE1-220ENST00000458038 CNOT11Q9UKZ1 510 aaKnown RBP19.79■□□□□ 0.76
CPNE1-220ENST00000458038 ERVK-19Q9WJR5 959 aa19.79■□□□□ 0.76
CPNE1-220ENST00000458038 LRRC3CA6NJW4 275 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 UBXN8O00124 270 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 HRKO00198 91 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 SNX4O95219 450 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 EPPINO95925 133 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 SLC35E2P0CK97 266 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 TIMP3P35625 211 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 TMED10P49755 219 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 HNRNPH2P55795 449 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 CAV1Q03135 178 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 DLG1Q12959 904 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 EBPQ15125 230 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 FAM83EQ2M2I3 478 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 FBXL19-AS1Q494R0 122 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 METTL2BQ6P1Q9 378 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 CYP20A1Q6UW02 462 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 DGAT2L6Q6ZPD8 337 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 MYLK4Q86YV6 388 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ZZZ3Q8IYH5 903 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 PM20D2Q8IYS1 436 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 TEX9Q8N6V9 391 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 FAM222BQ8WU58 562 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 MTERF1Q99551 399 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 SORBS1Q9BX66 1292 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 KCNF1Q9H3M0 494 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ACTR8Q9H981 624 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 SNX15Q9NRS6 342 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 RASSF1Q9NS23 344 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ZNF629Q9UEG4 869 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 MTRF1LQ9UGC7 380 aaKnown RBP19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ST6GALNAC2Q9UJ37 374 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ACOT9Q9Y305 439 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 ASB4Q9Y574 426 aa19.78■□□□□ 0.76
CPNE1-220ENST00000458038 HRNRQ86YZ3 2850 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 TRIM3O75382 744 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 NR2F6P10588 404 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 CEACAM8P31997 349 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 STX2P32856 288 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 ASCL1P50553 236 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 GPX6P59796 221 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 RPP38P78345 283 aaKnown RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 SLMAPQ14BN4 828 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 KBTBD12Q3ZCT8 623 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms