RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 BBS4Q96RK4 519 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
SYPL1-202ENST00000455385 INPP5KQ9BT40 448 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 TRIM4Q9C037 500 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 SERHLQ9NQF3 203 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 SEMA3GQ9NS98 782 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 PADI2Q9Y2J8 665 aa10.05□□□□□ -0.8
SYPL1-202ENST00000455385 PRSS51A0A1B0GVH4 220 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 A0A1W2PRB8 838 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 C1QTNF9BB2RNN3 333 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 HRKO00198 91 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SLC22A2O15244 555 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CREG1O75629 220 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 C6orf47O95873 294 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 IFNA16P05015 189 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ATP1B1P05026 303 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CT62P0C5K7 136 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 C1QTNF9P0C862 333 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 MMP11P24347 488 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 MPIP34949 423 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 STT3AP46977 705 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 NCBP2P52298 156 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 KCNK10P57789 538 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SERTAD2Q14140 314 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 DPY19L1Q2PZI1 675 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 PAGE3Q5JUK9 113 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ST13P4Q8IZP2 240 aaPredicted RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 LRRC25Q8N386 305 aaPredicted RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ZNF248Q8NDW4 579 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SIMC1Q8NDZ2 872 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 METTL21AQ8WXB1 218 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 RBM18Q96H35 190 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 FAM117AQ9C073 453 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ACSS1Q9NUB1 689 aaPredicted RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ATAD3AQ9NVI7 634 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SLAMF8Q9P0V8 285 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ENTPD4Q9Y227 616 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 IGF2RP11717 2491 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 LOC102723996A0A087X1L8 192 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 A0A1W2PP18 115 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CCDC154A6NI56 674 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 MASP2O00187 686 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 RNASET2O00584 256 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SOCS6O14544 535 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 KLK10O43240 276 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 C1QCP02747 245 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CYC1P08574 325 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 S1PR1P21453 382 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 OTX2P32243 289 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CDKN2CP42773 168 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 OR4D2P58180 307 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 HBA1P69905 142 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 TERF2Q15554 542 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 PRICKLE4Q2TBC4 344 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SLC2A7Q6PXP3 512 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ERMP1Q7Z2K6 904 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CPEB2Q7Z5Q1 589 aaKnown RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 KCNE4Q8WWG9 221 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 GTF2H4Q92759 462 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 KAT2AQ92830 837 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 KIAA1143Q96AT1 154 aaPredicted RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 DGAT2Q96PD7 388 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CXorf21Q9HAI6 301 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SLC6A13Q9NSD5 602 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 GIMAP4Q9NUV9 329 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ARL8BQ9NVJ2 186 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.04□□□□□ -0.8
SYPL1-202ENST00000455385 MAP10Q9P2G4 905 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
SYPL1-202ENST00000455385 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 TAF4O00268 1085 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 NKX2-8O15522 239 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 OR10H2O60403 315 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 CPSF4O95639 269 aaKnown RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 COX4I1P13073 169 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 NT5EP21589 574 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 NTSP30990 170 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 EIF2S3P41091 472 aaKnown RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 MRPS35P82673 323 aaKnown RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 EEF1A2Q05639 463 aaKnown RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 HSPB3Q12988 150 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 BIKQ13323 160 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 CYLC2Q14093 348 aaPredicted RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 MLC1Q15049 377 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 MAPKAPK3Q16644 382 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 TRMT12Q53H54 448 aaKnown RBP10.03□□□□□ -0.8
SYPL1-202ENST00000455385 ATP1A1-AS1Q5TC04 95 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 FAM91A1Q658Y4 838 aa10.03□□□□□ -0.8
SYPL1-202ENST00000455385 TRPM8Q7Z2W7 1104 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms