RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 MYL2P10916 166 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 FGF3P11487 239 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 NEFHP12036 1026 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SPINK2P20155 84 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 BGNP21810 368 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 GCSHP23434 173 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 DGKAP23743 735 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 OXTRP30559 389 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 MAT2AP31153 395 aaKnown RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CBSP35520 551 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 RGS4P49798 205 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CTSCP53634 463 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 DNAJB13P59910 316 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PPP2CBP62714 309 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PPP2CAP67775 309 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CDK3Q00526 305 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 MC2RQ01718 297 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ACSM2AQ08AH3 577 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 STX3Q13277 289 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 IRF4Q15306 451 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TSNQ15631 228 aaKnown RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CHI3L2Q15782 390 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 INAQ16352 499 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TTLL9Q3SXZ7 439 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF658BQ4V348 819 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 BCL7AQ4VC05 210 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TMEM31Q5JXX7 168 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 C6orf163Q5TEZ5 329 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ACSM2BQ68CK6 577 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZYG11AQ6WRX3 759 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 NAPRTQ6XQN6 538 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 DOK3Q7L591 496 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SPATA21Q7Z572 469 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ADGRE4PQ86SQ3 457 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 GPAT4Q86UL3 456 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIM74Q86UV6 250 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIM69Q86WT6 500 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 BEND2Q8NDZ0 799 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SRFBP1Q8NEF9 429 aaKnown RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TSTD1Q8NFU3 115 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR52L2PQ8NGH6 319 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CEP76Q8TAP6 659 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 RAB3IL1Q8TBN0 382 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 STAG3L4Q8TBR4 150 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 LRRC8CQ8TDW0 803 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ASZ1Q8WWH4 475 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZBTB8AQ96BR9 441 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 MOAP1Q96BY2 351 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 LINGO1Q96FE5 620 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF514Q96K75 400 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 LINC00615Q96LM1 132 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PANX3Q96QZ0 392 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 GAL3ST4Q96RP7 486 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ATOH8Q96SQ7 321 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 INTS14Q96SY0 518 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CPPED1Q9BRF8 314 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCM2Q9BSQ5 444 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 RANGRFQ9HD47 186 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLCO1B3Q9NPD5 702 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 FANCFQ9NPI8 374 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC6A13Q9NSD5 602 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ATXN10Q9UBB4 475 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PCDHGA5Q9Y5G8 931 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PCDHGA1Q9Y5H4 931 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 THADAQ6YHU6 1953 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC5A10A0PJK1 596 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 NPEPPSL1A6NEC2 478 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 NEMP2A6NFY4 417 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 TMEM202A6NGA9 273 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 OOEPA6NGQ2 149 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM90A8PA6NJQ4 464 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 A8MT66 165 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 A8MVJ9 347 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 UBXN8O00124 270 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 CHUKO15111 745 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 HCRTR2O43614 444 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 PI15O43692 258 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 NUAK1O60285 661 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 EDF1O60869 148 aaKnown RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 PEX11AO75192 247 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SMIM24O75264 130 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SNNO75324 88 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF217O75362 1048 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 POP7O75817 140 aaKnown RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SIX3O95343 332 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM107AO95990 144 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SERPINE1P05121 402 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 IGHV4-34P06331 123 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 DCNP07585 359 aaKnown RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM90A13PP0C7W8 464 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM90A24PP0C7X0 464 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 TPBGLP0DKB5 382 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 MPC1LP0DKB6 136 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 ENO3P13929 434 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCNA2P20248 432 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 IMPDH1P20839 514 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 AGAP20933 346 aa4.93□□□□□ -1.62
HMGB1P4-201ENST00000455362 SSTR4P31391 388 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms