RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SUZ12Q15022 739 aaKnown RBP12.91□□□□□ -0.34
CLK3-203ENST00000454830 ZNF425Q6IV72 752 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 BHLHB9Q6PI77 547 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ZNF438Q7Z4V0 828 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 C3orf14Q9HBI5 128 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ACSS1Q9NUB1 689 aaPredicted RBP12.91□□□□□ -0.34
CLK3-203ENST00000454830 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 KLHL3Q9UH77 587 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ASB4Q9Y574 426 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 PCDHGA2Q9Y5H1 932 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 SEC16AO15027 2179 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 C2orf74A8MZ97 194 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 HMGN4O00479 90 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 PCDH17O14917 1159 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 AHCYL1O43865 530 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ANXA11P50995 505 aaKnown RBP12.91□□□□□ -0.34
CLK3-203ENST00000454830 HPCAP84074 193 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 HYAL2Q12891 473 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 NPRL3Q12980 569 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 RAB39AQ14964 217 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 ZIC1Q15915 447 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 FRMPD2BQ6IN97 320 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 FBXO42Q6P3S6 717 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 C16orf62Q7Z3J2 963 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 NRROSQ86YC3 692 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 PJA1Q8NG27 643 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 RNF217Q8TC41 542 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 OR2A14Q96R47 310 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
CLK3-203ENST00000454830 PADI2Q9Y2J8 665 aa12.91□□□□□ -0.34
CLK3-203ENST00000454830 OR10H3O60404 316 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 B4GALT2O60909 372 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 HOXC4P09017 264 aaPredicted RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 XKP51811 444 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 PRR5P85299 388 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 TREX2Q9BQ50 279 aaPredicted RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 QRSL1Q9H0R6 528 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 P2RX6O15547 441 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 CRHBPP24387 322 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 CLK3P49761 638 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 KHKP50053 298 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 DUSP2Q05923 314 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 DGCR6Q14129 220 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 ZBED5Q49AG3 693 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 KDM4DQ6B0I6 523 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 LMX1AQ8TE12 382 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 ZDHHC1Q8WTX9 485 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 PIP5K1AQ99755 562 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 ZFYVE21Q9BQ24 234 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
CLK3-203ENST00000454830 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
CLK3-203ENST00000454830 H0YGG7 62 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 SLC1A7O00341 560 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 SDC3O75056 442 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 BLKP51451 505 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 CRISP3P54108 245 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 MAZP56270 477 aaKnown RBP12.9□□□□□ -0.35
CLK3-203ENST00000454830 ARF3P61204 181 aaPredicted RBP12.9□□□□□ -0.35
CLK3-203ENST00000454830 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.35
CLK3-203ENST00000454830 NUP43Q8NFH3 380 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 RSC1A1Q92681 617 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 NODALQ96S42 347 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.35
CLK3-203ENST00000454830 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.35
CLK3-203ENST00000454830 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.35
CLK3-203ENST00000454830 M0R3H8 397 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 AGRPO00253 132 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 CCNB2O95067 398 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 ZNF10P21506 573 aaPredicted RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 EIF2B5Q13144 721 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 CDK5R2Q13319 367 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 CRB2Q5IJ48 1285 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 ATAD3BQ5T9A4 648 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 GALNT15Q8N3T1 639 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 AQP11Q8NBQ7 271 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 EPB41L1Q9H4G0 881 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 CACYBPQ9HB71 228 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 EHD3Q9NZN3 535 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 SPACA6W5XKT8 324 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 M0R129 80 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms