RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRAMEF27A3QJZ7 478 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 CTSVO60911 334 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 DNAJB6O75190 326 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 FADS2O95864 444 aaKnown RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 NDUFS1P28331 727 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 PXNP49023 591 aaPredicted RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 PPM1FP49593 454 aaPredicted RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 NUDT6P53370 316 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 DYNC1I2Q13409 638 aaKnown RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 IL18R1Q13478 541 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 KEAP1Q14145 624 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 MAD2L1BPQ15013 274 aaPredicted RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 GPAT3Q53EU6 434 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 ZNF425Q6IV72 752 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 NRROSQ86YC3 692 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 SLC22A18ASQ8N1D0 253 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 AQP11Q8NBQ7 271 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 GPR32P1Q8NGA4 272 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 OR13F1Q8NGS4 319 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 OR9A2Q8NGT5 310 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
VTA1-203ENST00000452973 ACSS1Q9NUB1 689 aaPredicted RBP11.13□□□□□ -0.63
VTA1-203ENST00000452973 LOC105369274A0A096LPK9 316 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 LOC102723532A0A0G2JNH3 316 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 MFN2O95140 757 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 CPNE6O95741 557 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 RECKO95980 971 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 GSTM2P28161 218 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 KRT20P35900 424 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 MC3RP41968 323 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 XCR1P46094 333 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 STT3AP46977 705 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 RXRGP48443 463 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ID2Q02363 134 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 EMX1Q04741 257 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 SFSWAPQ12872 951 aaKnown RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 TOP3AQ13472 1001 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 CCINQ13939 588 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ADPRMQ3LIE5 342 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 FBXO42Q6P3S6 717 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TAF8Q7Z7C8 310 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TSPYL5Q86VY4 417 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 OR4N4Q8N0Y3 316 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 KLF15Q9UIH9 416 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 PCDHGA6Q9Y5G7 932 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 FANCMQ8IYD8 2048 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 M0R3H8 397 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 FFAR1O14842 300 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SLC35G6P0C7Q6 338 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 UGT2B7P16662 529 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TYRP1P17643 537 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TTKP33981 857 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 BUD31P41223 144 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 FRKP42685 505 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 LSM3P62310 102 aaKnown RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 MAPK11Q15759 364 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ASPGQ86U10 573 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 PAQR7Q86WK9 346 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 LACC1Q8IV20 430 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ENTHD1Q8IYW4 607 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 NATD1Q8N6N6 113 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 DENND6BQ8NEG7 585 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SUN3Q8TAQ9 357 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 OR2A14Q96R47 310 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ZNF607Q96SK3 696 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 THSD1Q9NS62 852 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 P2RX2Q9UBL9 471 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 PCDHGA2Q9Y5H1 932 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 P2RX6O15547 441 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TBX19O60806 448 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 GUCY1B2O75343 617 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 CCNB2O95067 398 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 GASTP01350 101 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 CSNK2A2P19784 350 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 CD247P20963 164 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 DCKP27707 260 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 PPP2R1BP30154 601 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SH3BGRP55822 239 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 SIM1P81133 766 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 RGS1Q08116 209 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 FRMPD2BQ6IN97 320 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 ZNF438Q7Z4V0 828 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 SRFBP1Q8NEF9 429 aaKnown RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 OR4D11Q8NGI4 311 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 THAP11Q96EK4 314 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 NMNAT1Q9HAN9 279 aaPredicted RBP11.12□□□□□ -0.63
VTA1-203ENST00000452973 SEMA3GQ9NS98 782 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 STARD5Q9NSY2 213 aa11.12□□□□□ -0.63
VTA1-203ENST00000452973 TAS2R7Q9NYW3 318 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms