RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ZMYND11Q15326 602 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 TEAD2Q15562 447 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 EXT1Q16394 746 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 LRRC37A5PQ49AS3 106 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 KCTD21Q4G0X4 260 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 FILIP1LQ4L180 1135 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 RABGAP1LQ5R372 815 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 RTL6Q6ICC9 239 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 ASPHD2Q6ICH7 369 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 LRRC70Q7Z2Q7 622 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 TRMT11Q7Z4G4 463 aaKnown RBP4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF329Q86UD4 541 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 CTAGE6Q86UF2 777 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR7A2PQ8NGA2 310 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR2T11Q8NH01 316 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 CD99L2Q8TCZ2 262 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 OSTF1Q92882 214 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 NXPE2Q96DL1 559 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 RAB40CQ96S21 281 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCT7Q99832 543 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 PITPNM3Q9BZ71 974 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 WWP1Q9H0M0 922 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 SLC26A1Q9H2B4 701 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 EGLN3Q9H6Z9 239 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 ATP13A3Q9H7F0 1226 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 C2orf42Q9NWW7 574 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 LHX3Q9UBR4 397 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 FBXL4Q9UKA2 621 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF490Q9ULM2 529 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 B9D1Q9UPM9 204 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 SPACA6W5XKT8 324 aa4.4□□□□□ -1.71
HMGB1P26-201ENST00000452520 SH3PXD2BA1X283 911 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 EPHB6O15197 1021 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 DCXO43602 365 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 KIAA0754O94854 1291 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 PAK4O96013 591 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 APRTP07741 180 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 HIST1H2AGP0C0S8 130 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 DPP4P27487 766 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 HTR2AP28223 471 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 ACADVLP49748 655 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR1D5P58170 312 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 NUCB2P80303 420 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CNTN2Q02246 1040 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CNTN1Q12860 1018 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 NFATC2Q13469 925 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 GRB14Q14449 540 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 MEF2DQ14814 521 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 OR1C1Q15619 314 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 TRIP10Q15642 601 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CFAP221Q4G0U5 840 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 LCN1P1Q5VSP4 162 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 TPGS2Q68CL5 300 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 NIPAL3Q6P499 406 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 SLC39A4Q6P5W5 647 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 LRRC8BQ6P9F7 803 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF790Q6PG37 636 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CBLN3Q6UW01 205 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCBE1Q6UXH8 406 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 Q6ZTC4 211 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 G2E3Q7L622 706 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 WDR49Q8IV35 697 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 PARP8Q8N3A8 854 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 GPR148Q8TDV2 347 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 SUSD6Q92537 303 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 HIST1H2ACQ93077 130 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 VPS35Q96QK1 796 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCM2Q9BSQ5 444 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 WRAP53Q9BUR4 548 aaKnown RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CAPS2Q9BXY5 557 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 FAM49AQ9H0Q0 323 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 ZNF696Q9H7X3 374 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 ERVK-18Q9QC07 812 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 P2RX2Q9UBL9 471 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 C19orf25Q9UFG5 118 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 MAN1B1Q9UKM7 699 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 CLEC4AQ9UMR7 237 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 RNF115Q9Y4L5 304 aa4.39□□□□□ -1.71
HMGB1P26-201ENST00000452520 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 SNURFLB1AK76 121 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 SDHDO14521 159 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 ARPC1BO15143 372 aaKnown RBP4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 LINC01565O15544 149 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 B4GAT1O43505 415 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 ECE2O60344 883 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 CALCAP01258 141 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 ALDH3B1P43353 468 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 ACADSBP45954 432 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 NPY2RP49146 381 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 RGS4P49798 205 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCR4P51679 360 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 MYL7Q01449 175 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 MFGE8Q08431 387 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 CCDC6Q16204 474 aa4.38□□□□□ -1.71
HMGB1P26-201ENST00000452520 TCEAL6Q6IPX3 200 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms