RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 PRPF18Q99633 342 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 BRINP2Q9C0B6 783 aa13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 G3BP2Q9UN86 482 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 LOC400499M0QZD8 3231 aa13.62□□□□□ -0.23
TRAPPC12-211ENST00000452495 ITPR1Q14643 2758 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 WASHC1A8K0Z3 465 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 AKAP10O43572 662 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 SLITRK5O94991 958 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 LRATO95237 230 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 TNNI3P19429 210 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 LSP1P33241 339 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 MRPL19P49406 292 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 CHAF1BQ13112 559 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 TBR1Q16650 682 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 DPY19L1Q2PZI1 675 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 C19orf48Q6RUI8 117 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 GALNT12Q8IXK2 581 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 RIMKLAQ8IXN7 391 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 RFWD2Q8NHY2 731 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 PTPMT1Q8WUK0 201 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 RIT1Q92963 219 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 GFM2Q969S9 779 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 VMP1Q96GC9 406 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 FBXL20Q96IG2 436 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 EBF4Q9BQW3 602 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 DPY30Q9C005 99 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 LHPPQ9H008 270 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 MGAQ8IWI9 3026 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 EXPH5Q8NEV8 1989 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
TRAPPC12-211ENST00000452495 TNRC6AQ8NDV7 1962 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 A0A0G2JND7 137 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 A0A1W2PS29 197 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 A8MUA0 341 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 MYO1GB0I1T2 1018 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 ANKRD28O15084 1053 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 UBDO15205 165 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 PDPK1O15530 556 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 CEACAM4O75871 244 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 IFI6P09912 130 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 NT5EP21589 574 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 ITGA3P26006 1051 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 MPIP34949 423 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 FEN1P39748 380 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 STX1BP61266 288 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 GNGT1P63211 74 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 Q0VFX4 171 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 CGB2Q6NT52 195 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 GALNT16Q8N428 558 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 SLC2A12Q8TD20 617 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 ZNF675Q8TD23 568 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 TESCQ96BS2 214 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 ERP27Q96DN0 273 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 ZBED6CLQ96FA7 236 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 THOC1Q96FV9 657 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 SEMA4CQ9C0C4 833 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 CXorf21Q9HAI6 301 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 SDR39U1Q9NRG7 319 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 KLHL14Q9P2G3 628 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 TUBD1Q9UJT1 453 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 DCTN4Q9UJW0 460 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 TRIM33Q9UPN9 1127 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 GPR45Q9Y5Y3 372 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 CACNA1GO43497 2377 aa13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 KMT2BQ9UMN6 2715 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-211ENST00000452495 MYOCOSA0A1B0GUC4 107 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 GABRR3A8MPY1 467 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 E9PBE3 544 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 ERVH48-1M5A8F1 160 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 DDAH2O95865 285 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 FRKP42685 505 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 ATP4BP51164 291 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 CLCN2P51788 898 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 PGDP52209 483 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 NCBP2P52298 156 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 POLE2P56282 527 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 DUSP2Q05923 314 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 MYBPC3Q14896 1274 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 RPS6KA2Q15349 733 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 PRICKLE4Q2TBC4 344 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 ZNF385BQ569K4 471 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 TMEM198Q66K66 360 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 ANKRD26P1Q6NSI1 321 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 VWA5B2Q8N398 1253 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 KRTCAP2Q8N6L1 136 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 GLB1L3Q8NCI6 653 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 APCDD1LQ8NCL9 501 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 OR7A2PQ8NGA2 310 aa13.59□□□□□ -0.23
TRAPPC12-211ENST00000452495 OR1N1Q8NGS0 311 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms