RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 WDPCPO95876 746 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 LINC00032P0C843 101 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 NEFHP12036 1026 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 DRD2P14416 443 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 GALNSP34059 522 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 XKP51811 444 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 ABCE1P61221 599 aaKnown RBP18.57■□□□□ 0.56
COL9A3-202ENST00000452372 ARG2P78540 354 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 KIAA0040Q15053 153 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 ARMC10Q8N2F6 343 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 OR1N1Q8NGS0 311 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 OR2T11Q8NH01 316 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 AGR3Q8TD06 166 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 C19orf60Q96EN9 201 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 CDCP1Q9H5V8 836 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 C1orf109Q9NX04 203 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 NKIRAS1Q9NYS0 192 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF223Q9UK11 482 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-202ENST00000452372 PSME2Q9UL46 239 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-202ENST00000452372 CSAG2Q9Y5P2 127 aa18.57■□□□□ 0.56
COL9A3-202ENST00000452372 UNC79Q9P2D8 2635 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 CENPEQ02224 2701 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 TCP11X1B4DZS4 312 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 CDK2AP1O14519 115 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 DYRK3O43781 588 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 OR10H2O60403 315 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 SEMA7AO75326 666 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 LYPLA1O75608 230 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-202ENST00000452372 IL3P08700 152 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 BGNP21810 368 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 HEPACAMQ14CZ8 416 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 TLR1Q15399 786 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 NOXRED1Q6NXP6 359 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 DGAT2L6Q6ZPD8 337 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 DDIASQ8IXT1 998 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 MMP21Q8N119 569 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 SLC2A12Q8TD20 617 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 SENP5Q96HI0 755 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-202ENST00000452372 ATP6V1G3Q96LB4 118 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 SH3GL2Q99962 352 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 EBPLQ9BY08 206 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 OR8D2Q9GZM6 311 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF395Q9H8N7 513 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-202ENST00000452372 LRTM1Q9HBL6 345 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 SLAMF7Q9NQ25 335 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 ABI3Q9P2A4 366 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 HEY2Q9UBP5 337 aa18.56■□□□□ 0.56
COL9A3-202ENST00000452372 WBP11Q9Y2W2 641 aaKnown RBP18.56■□□□□ 0.56
COL9A3-202ENST00000452372 A0A1W2PS29 197 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 PIP5K1BO14986 540 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 MAN1A2O60476 641 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ZFAND5O76080 213 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 RNF224P0DH78 156 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 CPMP14384 443 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 SLC1A6P48664 564 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ALDH9A1P49189 494 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 MLF1P58340 268 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF763Q0D2J5 394 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 STX3Q13277 289 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 NR6A1Q15406 480 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 SPRED3Q2MJR0 410 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 HSDL2Q6YN16 418 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 BEST3Q8N1M1 668 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF321PQ8N8H1 164 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 CATSPER1Q8NEC5 780 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL9A3-202ENST00000452372 MGARPQ8TDB4 240 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF721Q8TF20 911 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 RIT1Q92963 219 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ART5Q96L15 291 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 CCT7Q99832 543 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 C20orf27Q9GZN8 174 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 ILKAPQ9H0C8 392 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-202ENST00000452372 RAP2CQ9Y3L5 183 aa18.55■□□□□ 0.56
COL9A3-202ENST00000452372 POLR3HQ9Y535 204 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-202ENST00000452372 DOPEY1Q5JWR5 2465 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 OR5H15A6NDH6 313 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 LSM1O15116 133 aaKnown RBP18.54■□□□□ 0.56
COL9A3-202ENST00000452372 ERAL1O75616 437 aaKnown RBP18.54■□□□□ 0.56
COL9A3-202ENST00000452372 IGKV3-11P04433 115 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 PORP16435 677 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-202ENST00000452372 TNFSF10P50591 281 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 BST1Q10588 318 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF169Q14929 603 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-202ENST00000452372 XKR7Q5GH72 579 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF781Q8N8C0 355 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 OR8K3Q8NH51 312 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 SNRNP40Q96DI7 357 aaKnown RBP18.54■□□□□ 0.56
COL9A3-202ENST00000452372 FBXL20Q96IG2 436 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 FCRL1Q96LA6 429 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 SORT1Q99523 831 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 CXorf21Q9HAI6 301 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 COPS7AQ9UBW8 275 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 HAO1Q9UJM8 370 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 TMED5Q9Y3A6 229 aa18.54■□□□□ 0.56
COL9A3-202ENST00000452372 TMEM200CA6NKL6 621 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 PRKNO60260 465 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 F10P00742 488 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 CSNK2A2P19784 350 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms