RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CDK6Q00534 326 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 ZIC1Q15915 447 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 DEFB133Q30KQ1 61 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 CRB2Q5IJ48 1285 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 FAM180BQ6P0A1 224 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 BAHD1Q8TBE0 780 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 TEFMQ96QE5 360 aaKnown RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 OR2M4Q96R27 311 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 THUMPD1Q9NXG2 353 aaKnown RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 NDUFAF4Q9P032 175 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 COL5A1P20908 1838 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 A0A0A6YYD5 115 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 LRIT2A6NDA9 550 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 E9PQ18 207 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 ZNF701M0R085 212 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 SIGLEC6O43699 453 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 UGT2B11O75310 529 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 JRKO75564 520 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 BCL6P41182 706 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 ALDH9A1P49189 494 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 CLK3P49761 638 aaKnown RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 GABARAPL2P60520 117 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 KEAP1Q14145 624 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 KRT33BQ14525 404 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 PUM1Q14671 1186 aaKnown RBP eCLIP10.14□□□□□ -0.797e-8■■□□□ 12.9
PKP4-206ENST00000452162 RAB39AQ14964 217 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 IFI44LQ53G44 452 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 BROXQ5VW32 411 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 SAXO2Q658L1 398 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 ADCK2Q7Z695 626 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 AMER3Q8N944 861 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 TTLQ8NG68 377 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 NEURL3Q96EH8 262 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 NLNQ9BYT8 704 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 RIBC2Q9H4K1 309 aa10.14□□□□□ -0.79
PKP4-206ENST00000452162 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 TEX10Q9NXF1 929 aaPredicted RBP10.14□□□□□ -0.79
PKP4-206ENST00000452162 HEATR5BQ9P2D3 2071 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 KNTC1P50748 2209 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 PRAMEF25A6NGN4 478 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ABCB7O75027 752 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 HTR1AP08908 422 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 MYF5P13349 255 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 DDX5P17844 614 aaKnown RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 CSRP1P21291 193 aaKnown RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 AGXTP21549 392 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 AK4P27144 223 aaPredicted RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 TTKP33981 857 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 NOVA1P51513 510 aaKnown RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 RPS6KA3P51812 740 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 DSTNP60981 165 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 TRA2BP62995 288 aaKnown RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 ABATP80404 500 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 HYAL2Q12891 473 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 TOP3AQ13472 1001 aaPredicted RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 RAPSNQ13702 412 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ELOCQ15369 112 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 TMEM35AQ53FP2 167 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 OR4C11Q6IEV9 310 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 SLC30A8Q8IWU4 369 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 OR2L3Q8NG85 312 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 OR4C6Q8NH72 309 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 SGCDQ92629 289 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ZNF566Q969W8 418 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ISOC1Q96CN7 298 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 TUBA1CQ9BQE3 449 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ADNPQ9H2P0 1102 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 KIR3DX1Q9H7L2 352 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 CXorf21Q9HAI6 301 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 MRPS30Q9NP92 439 aaKnown RBP10.13□□□□□ -0.79
PKP4-206ENST00000452162 TMEM184CQ9NVA4 438 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 SPHK1Q9NYA1 384 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 ANGPT4Q9Y264 503 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 PCDHGB3Q9Y5G1 929 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 CSNK1G3Q9Y6M4 447 aa10.13□□□□□ -0.79
PKP4-206ENST00000452162 LMO7DNF2Z398 122 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 M0QX08 132 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 SLC1A7O00341 560 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 HAT1O14929 419 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 PPM1DO15297 605 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 B4GALT2O60909 372 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 TRMUO75648 421 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 TNFRSF1BP20333 461 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 EEF1B2P24534 225 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 RRM2P31350 389 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 MANFP55145 182 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 NEDD8Q15843 81 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ADPRMQ3LIE5 342 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 XAF1Q6GPH4 301 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ZNF793Q6ZN11 406 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 TAF8Q7Z7C8 310 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 NRROSQ86YC3 692 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ERI1Q8IV48 349 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 SFTPA2Q8IWL1 248 aa10.12□□□□□ -0.79
PKP4-206ENST00000452162 ZC3H7AQ8IWR0 971 aaKnown RBP10.12□□□□□ -0.79
PKP4-206ENST00000452162 PSMA8Q8TAA3 256 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms