RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 DNASE1L1P49184 302 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 SMSP52788 366 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 CDH13P55290 713 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 IFT88Q13099 833 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 TRAF3Q13114 568 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ZNF267Q14586 743 aaPredicted RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 CDSNQ15517 529 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 CMPK2Q5EBM0 449 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 RNF111Q6ZNA4 994 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 FAM47EQ6ZV65 393 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 FGD2Q7Z6J4 655 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 C9orf40Q8IXQ3 194 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 SRRM1Q8IYB3 904 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 ZCCHC7Q8N3Z6 543 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 L3MBTL4Q8NA19 623 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 FAM13CQ8NE31 585 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 OR2M7Q8NG81 312 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 OR4F6Q8NGB9 312 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 OR52N2Q8NGI0 321 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 OR5L2Q8NGL0 311 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 KIF18AQ8NI77 898 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 WDR20Q8TBZ3 569 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ZNF721Q8TF20 911 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 RBM18Q96H35 190 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 SENP5Q96HI0 755 aaPredicted RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 HBEGFQ99075 208 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 SERPINI1Q99574 410 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ZNF717Q9BY31 904 aaPredicted RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 FUT8Q9BYC5 575 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 MRPL1Q9BYD6 325 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 MRPL46Q9H2W6 279 aaKnown RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 WDR41Q9HAD4 459 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ZBTB26Q9HCK0 441 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 TEX10Q9NXF1 929 aaPredicted RBP8.03□□□□□ -1.12
RFX3-209ENST00000451859 MS4A12Q9NXJ0 267 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 TMCO1Q9UM00 188 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 PPT2Q9UMR5 302 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 MEMO1Q9Y316 297 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 ASB4Q9Y574 426 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
RFX3-209ENST00000451859 TACC2O95359 2948 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 IQANK1A0A1B0GTG1 560 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 A0A1B0GTL3 188 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 CCDC189A1A4V9 331 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SYNDIG1LA6NDD5 238 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 A8MT66 165 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 STX16-NPEPL1H3BU86 382 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 KIF2AO00139 706 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 ACOT7O00154 380 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 PPP6CO00743 305 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 CDK2AP1O14519 115 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 STX16O14662 325 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 PGRMC2O15173 223 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 HNRNPRO43390 633 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 PROM1O43490 865 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SNRPAP09012 282 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 CNTFP26441 200 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 HTR1EP28566 365 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 IGLV3-21P80748 117 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ART3Q13508 389 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 CUL3Q13618 768 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 GLE1Q53GS7 698 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 TCHHL1Q5QJ38 904 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 PRAMEF20Q5VT98 475 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 FRG2Q64ET8 278 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 OR52E8Q6IFG1 317 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 OPN5Q6U736 354 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 RPTNQ6XPR3 784 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 BNC2Q6ZN30 1099 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 Q6ZPB1 254 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 RTL4Q6ZR62 310 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SLC29A4Q7RTT9 530 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 MILR1Q7Z6M3 343 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 DOLPP1Q86YN1 238 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 CHERPQ8IWX8 916 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 GPALPP1Q8IXQ4 340 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ZFP62Q8NB50 900 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 OR5M3Q8NGP4 307 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SLC22A8Q8TCC7 542 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 TANKQ92844 425 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 RIT1Q92963 219 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ISL2Q96A47 359 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 FBXL20Q96IG2 436 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ART5Q96L15 291 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 FRG2BQ96QU4 278 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 MRPL57Q9BQC6 102 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 TTTY12Q9BZ98 90 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ELOVL6Q9H5J4 265 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 DDX31Q9H8H2 851 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 ZNF395Q9H8N7 513 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 FARSBQ9NSD9 589 aaKnown RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 SACM1LQ9NTJ5 587 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 TUBA8Q9NY65 449 aaPredicted RBP8.02□□□□□ -1.13
RFX3-209ENST00000451859 TNFRSF10DQ9UBN6 386 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 TBK1Q9UHD2 729 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms