RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CKMT2P17540 419 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 AQP1P29972 269 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 MAGEA2P43356 314 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 ARL4DP49703 201 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SHC2P98077 582 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SQSTM1Q13501 440 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 REEP3Q6NUK4 255 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 PPP4R4Q6NUP7 873 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TMEM107Q6UX40 140 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 FKBP9P1Q75LS8 142 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 KMT5CQ86Y97 462 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 PACRGLQ8N7B6 248 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SLC35G5Q96KT7 338 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 C9orf16Q9BUW7 83 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CLK4Q9HAZ1 481 aaKnown RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 C3orf14Q9HBI5 128 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 DNAJB9Q9UBS3 223 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 OAZ3Q9UMX2 235 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CLCA2Q9UQC9 943 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 ANGPT4Q9Y264 503 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 U3KQA8 63 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 A0A0A6YYC8 382 aaPredicted RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 I3L1I5 382 aaPredicted RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SUV39H1O43463 412 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CHST10O43529 356 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 MED26O95402 600 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 NSA2O95478 260 aaKnown RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 CER1O95813 267 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SEMG1P04279 462 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TFPTP0C1Z6 253 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CPMP14384 443 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 HSPA13P48723 471 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 ANXA11P50995 505 aaKnown RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 PCBP3P57721 371 aaKnown RBP13.41□□□□□ -0.26
USP39-207ENST00000450066 FOLH1Q04609 750 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 GRM7Q14831 915 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 MYBPC3Q14896 1274 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 GPR19Q15760 415 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CYBRD1Q53TN4 286 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TRIM61Q5EBN2 209 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 CRB2Q5IJ48 1285 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SZRD1Q7Z422 152 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 BMP8AQ7Z5Y6 402 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 D2HGDHQ8N465 521 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 GALNT4Q8N4A0 578 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 OR10Q1Q8NGQ4 319 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SLC38A5Q8WUX1 472 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SLC41A2Q96JW4 573 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 HSH2DQ96JZ2 352 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 NTN4Q9HB63 628 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 IL1RAPQ9NPH3 570 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 IRAK4Q9NWZ3 460 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 NTMQ9P121 344 aa13.41□□□□□ -0.26
USP39-207ENST00000450066 TTC28Q96AY4 2481 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 SAC3D1A6NKF1 404 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 TOX3O15405 576 aaPredicted RBP13.4□□□□□ -0.26
USP39-207ENST00000450066 GPR75O95800 540 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 CST1P01037 141 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 IFNA14P01570 189 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 MSL3P1P0C860 447 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 MATN1P21941 496 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 PTGER1P34995 402 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 MC3RP41968 323 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 SEPHS1P49903 392 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 SELENOWP63302 87 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 TXNL4AP83876 142 aaKnown RBP13.4□□□□□ -0.26
USP39-207ENST00000450066 COL9A2Q14055 689 aaPredicted RBP13.4□□□□□ -0.26
USP39-207ENST00000450066 KCNAB1Q14722 419 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 GUSBP11Q6P575 273 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 OR4N5Q8IXE1 308 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 TMEM52Q8NDY8 209 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 VPS50Q96JG6 964 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 MAGED4Q96JG8 741 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 ZNF597Q96LX8 424 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 DOHHQ9BU89 302 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 SPRTNQ9H040 489 aaPredicted RBP13.4□□□□□ -0.26
USP39-207ENST00000450066 ZNF639Q9UID6 485 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 ZNF451Q9Y4E5 1061 aa13.4□□□□□ -0.26
USP39-207ENST00000450066 CPED1A4D0V7 1026 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 BLACEA4D250 179 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 EME2A4GXA9 379 aaPredicted RBP13.4□□□□□ -0.27
USP39-207ENST00000450066 C5orf58C9J3I9 102 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 FAM227AF5H4B4 570 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 H3BMH7 237 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 UPK1AO00322 258 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 PLOD2O00469 737 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 SOCS2O14508 198 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 ACOX3O15254 700 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 FGF17O60258 216 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms