RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PISDQ9UG56 409 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 RAPGEFL1Q9UHV5 662 aa18.08■□□□□ 0.49
RPS28-202ENST00000449223 C9orf172C9J069 976 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 TGFBR3LH3BV60 316 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 PLOD2O00469 737 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 B4GALT2O60909 372 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 DLGAP3O95886 979 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 GSNP06396 782 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 C8orf89P0DMQ9 161 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 SDHBP21912 280 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 UQCRC2P22695 453 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 GALNSP34059 522 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 PGM1P36871 562 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 SLC7A2P52569 658 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 MAPK10P53779 464 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 KCNJ2P63252 427 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 RHAGQ02094 409 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 HSPB3Q12988 150 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 TARDBPQ13148 414 aaKnown RBP eCLIP18.08■□□□□ 0.48
RPS28-202ENST00000449223 SLC13A2Q13183 592 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 SERTAD2Q14140 314 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 ZNF750Q32MQ0 723 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 MRPL14Q6P1L8 145 aaKnown RBP18.08■□□□□ 0.48
RPS28-202ENST00000449223 ZNF621Q6ZSS3 439 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 GALNT15Q8N3T1 639 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 THTPAQ9BU02 230 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 EPS8L2Q9H6S3 715 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 WDR54Q9H977 334 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 SEMA3GQ9NS98 782 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 CMTM6Q9NX76 183 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 CTSFQ9UBX1 484 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 CD300AQ9UGN4 299 aa18.08■□□□□ 0.48
RPS28-202ENST00000449223 PMS2P1A4D2B8 440 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 NME4O00746 187 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 DNAJA2O60884 412 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 JRKO75564 520 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 KLK3P07288 261 aaPredicted RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 ABCB1P08183 1280 aaPredicted RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 NQO1P15559 274 aaKnown RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 AGXTP21549 392 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 CDK9P50750 372 aaKnown RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 VAC14Q08AM6 782 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 RABL3Q5HYI8 236 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 SAMD4BQ5PRF9 694 aaKnown RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 TMEM164Q5U3C3 297 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 OR4N5Q8IXE1 308 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 PLPP5Q8NEB5 264 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 STT3BQ8TCJ2 826 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 SFXN5Q8TD22 340 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 MOAP1Q96BY2 351 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 PELOQ9BRX2 385 aaKnown RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 KAT8Q9H7Z6 458 aaKnown RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 TPT1P8Q9HAU6 139 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.07■□□□□ 0.48
RPS28-202ENST00000449223 SATB2Q9UPW6 733 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 CORO2BQ9UQ03 480 aa18.07■□□□□ 0.48
RPS28-202ENST00000449223 CFAP54Q96N23 3096 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 CLIC1O00299 241 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 CDC123O75794 336 aaPredicted RBP18.06■□□□□ 0.48
RPS28-202ENST00000449223 STK17BO94768 372 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 RECKO95980 971 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 ZGLP1P0C6A0 271 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 HSD17B1P14061 328 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 GPX2P18283 190 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 SOX18P35713 384 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 MAGEA8P43361 318 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 EEFSECP57772 596 aaKnown RBP18.06■□□□□ 0.48
RPS28-202ENST00000449223 BTG2P78543 158 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 OCA2Q04671 838 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 MAP7Q14244 749 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 ERV3-1Q14264 604 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 ZNF628Q5EBL2 1059 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 VWA2Q5GFL6 755 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 IGF2-ASQ6U949 168 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 TMPRSS7Q7RTY8 843 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 ULK2Q8IYT8 1036 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 CTHRC1Q96CG8 243 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 ELP4Q96EB1 424 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 NEURL3Q96EH8 262 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 RAB3IPQ96QF0 476 aaPredicted RBP18.06■□□□□ 0.48
RPS28-202ENST00000449223 SLC35A5Q9BS91 424 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 IKZF5Q9H5V7 419 aa18.06■□□□□ 0.48
RPS28-202ENST00000449223 IFT80Q9P2H3 777 aaPredicted RBP18.06■□□□□ 0.48
RPS28-202ENST00000449223 NXT1Q9UKK6 140 aaKnown RBP18.06■□□□□ 0.48
RPS28-202ENST00000449223 A0A087WV62 115 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 TCRBV16S1A1N1A0A5B0 115 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 PRORSD1PA6NEY8 169 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 NVLO15381 856 aaKnown RBP18.05■□□□□ 0.48
RPS28-202ENST00000449223 STT3AP46977 705 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 EFNA3P52797 238 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 MVDP53602 400 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 MTPNP58546 118 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 STX4Q12846 297 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 CEACAM7Q14002 265 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 SELPLGQ14242 412 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 FXNQ16595 210 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 NKG7Q16617 165 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 PRICKLE4Q2TBC4 344 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 C3orf38Q5JPI3 329 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 SAXO2Q658L1 398 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms