RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 OR51B5Q9H339 312 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CAB39LQ9H9S4 337 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 PLEKHA1Q9HB21 404 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 B3GALT1Q9Y5Z6 326 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SMCO3A2RU48 225 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CREG1O75629 220 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 NR0B1P51843 470 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSCP56915 257 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 GNGT1P63211 74 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 LCP2Q13094 533 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TGIF1Q15583 401 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 NHSL2Q5HYW2 709 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CARD17Q5XLA6 110 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 DRICH1Q6PGQ1 229 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 DCBLD1Q8N8Z6 715 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 MAGEB18Q96M61 343 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 WDR83Q9BRX9 315 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRC3Q9BY71 257 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ALOXE3Q9BYJ1 711 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 VPS29Q9UBQ0 182 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ATPIF1Q9UII2 106 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCNS2Q9ULS6 477 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 AP3M1Q9Y2T2 418 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CHD5Q8TDI0 1954 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 IGHV1OR21-1A0A087WYE8 117 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CXorf51AA0A1B0GTR3 108 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1W2PQF6 199 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 MPPED1O15442 326 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 IGLV3-27P01718 113 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TCF4P15884 667 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL7RP16871 459 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 RGS8P57771 180 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CD300LGQ6UXG3 332 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 C16orf47Q6ZP98 133 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CHERPQ8IWX8 916 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCDC197Q8NCU1 140 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR5T3Q8NGG3 340 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ESAMQ96AP7 390 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 C16orf58Q96GQ5 468 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 RAB1BQ9H0U4 201 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMPRSS11EQ9UL52 423 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 B3GNT3Q9Y2A9 372 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TP53TG5Q9Y2B4 290 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ELOA3DA6NLF2 546 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 EIF1AYO14602 144 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF823P16415 610 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 FCARP24071 287 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 BCL6P41182 706 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 FABP6P51161 128 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TEKQ02763 1124 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 IHHQ14623 411 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SSPNQ14714 243 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ELOA3BQ3SY89 546 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPIN4Q56A73 249 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SFT2D3Q587I9 215 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC22A10Q63ZE4 541 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CASP12Q6UXS9 341 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPATA19Q7Z5L4 167 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CAMKMTQ7Z624 323 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ANKK1Q8NFD2 765 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ELOA3Q8NG57 546 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ADAMTS14Q8WXS8 1223 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 NSMCE3Q96MG7 304 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 EPB41L4BQ9H329 900 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC2A6Q9UGQ3 507 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 STOML2Q9UJZ1 356 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 H0YGG7 62 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 M0R1B8 84 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 SMAD9O15198 467 aaKnown RBP5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 NKX2-8O15522 239 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR1I1O60431 355 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARF3P61204 181 aaPredicted RBP5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARHGAP11AQ6P4F7 1023 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 LRIG3Q6UXM1 1119 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 THSD4Q6ZMP0 1018 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMPRSS7Q7RTY8 843 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 ABI3BPQ7Z7G0 1075 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 SYVN1Q86TM6 617 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR4A15Q8NGL6 344 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 EEF1AKMT1Q8WVE0 214 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 FBXO17Q96EF6 278 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC35G5Q96KT7 338 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 JMJD8Q96S16 334 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 P4HTMQ9NXG6 502 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 DNAJB11Q9UBS4 358 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 C2orf92A0A1B0GVN3 265 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 C17orf105B2RV13 164 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 TSPAN9O75954 239 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 KLHL2O95198 593 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 KLK1P06870 262 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRPS2P11908 318 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 FOLH1Q04609 750 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 FBXO48Q5FWF7 155 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 DCST1Q5T197 706 aa5.34□□□□□ -1.56
CDC42BPA-209ENST00000448940 ANKRD34AQ69YU3 496 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms