RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TUBGCP3Q96CW5 907 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 C19orf60Q96EN9 201 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 SORT1Q99523 831 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CNPPD1Q9BV87 410 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 C20orf27Q9GZN8 174 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 ZBTB20Q9HC78 741 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 MYNNQ9NPC7 610 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 CES1P1Q9UKY3 287 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 PPIEQ9UNP9 301 aaKnown RBP13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 ENTPD4Q9Y227 616 aa13.07□□□□□ -0.32
GTF3C3-206ENST00000448539 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 J3QKU1 62 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 FCHO1O14526 889 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 DDCP20711 480 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 FEN1P39748 380 aaKnown RBP13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 CASRP41180 1078 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF267Q14586 743 aaPredicted RBP13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 XKR7Q5GH72 579 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 PRICKLE2Q7Z3G6 844 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 CRLF3Q8IUI8 442 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 GALNT12Q8IXK2 581 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 FNDC5Q8NAU1 212 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 SUN3Q8TAQ9 357 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 LRRC8CQ8TDW0 803 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 THAP3Q8WTV1 239 aaPredicted RBP13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 PNPLA2Q96AD5 504 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 SLAMF7Q9NQ25 335 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 PLA2G3Q9NZ20 509 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 HEY2Q9UBP5 337 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 B3GNT3Q9Y2A9 372 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
GTF3C3-206ENST00000448539 GABRR3A8MPY1 467 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 DDAH2O95865 285 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 WDPCPO95876 746 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 F10P00742 488 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 DDX5P17844 614 aaKnown RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ASMTP46597 345 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 CD97P48960 835 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 GPR143P51810 404 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ERVK-8P63133 956 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 TLR1Q15399 786 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 SPRED3Q2MJR0 410 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF750Q32MQ0 723 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 RFTN2Q52LD8 501 aaPredicted RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 HSP90B2PQ58FF3 399 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 SLC6A19Q695T7 634 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 FAM71E1Q6IPT2 247 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 DGAT2L6Q6ZPD8 337 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 BEST3Q8N1M1 668 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 LRRC25Q8N386 305 aaPredicted RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 DOK4Q8TEW6 326 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF721Q8TF20 911 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 HAS2Q92819 552 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 FBXL20Q96IG2 436 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 C3orf30Q96M34 536 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 TSSK3Q96PN8 268 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 BBS4Q96RK4 519 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 UTP23Q9BRU9 249 aaKnown RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 BRINP2Q9C0B6 783 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 RNF32Q9H0A6 362 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 CXorf21Q9HAI6 301 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 SLC35C2Q9NQQ7 365 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 INTS9Q9NV88 658 aaKnown RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 PNPOQ9NVS9 261 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF446Q9NWS9 450 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 HAO1Q9UJM8 370 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 EIF3LQ9Y262 564 aaKnown RBP13.05□□□□□ -0.32
GTF3C3-206ENST00000448539 A0A1W2PS29 197 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 OR5H15A6NDH6 313 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 TTLL8A6PVC2 850 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 PYCARD-AS1I3L0S3 204 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 KLF11O14901 512 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 SUV39H1O43463 412 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 SNNO75324 88 aaPredicted RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 VPS4BO75351 444 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 ATP1B1P05026 303 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 KITP10721 976 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 BCKDHAP12694 445 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 SDC1P18827 310 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 NTSP30990 170 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 MPIP34949 423 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 MLF1P58340 268 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 OC90Q02509 493 aaPredicted RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF169Q14929 603 aaPredicted RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 C6orf136Q5SQH8 315 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 RNF111Q6ZNA4 994 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms