RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF607Q96SK3 696 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 NELL2Q99435 816 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF717Q9BY31 904 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 NUP210Q8TEM1 1887 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-204ENST00000447182 A0A1W2PRQ8 180 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 STK25O00506 426 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 PLPP1O14494 284 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 PDPK1O15530 556 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 CSF3P09919 207 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 TYRP14679 529 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 SLC9A3P48764 834 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 EFNB1P98172 346 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 CNTN1Q12860 1018 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 SLAMF1Q13291 335 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 SYT14P1Q58G82 188 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 FAM180BQ6P0A1 224 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 LCTLQ6UWM7 567 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 C6orf120Q7Z4R8 191 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 GALNT12Q8IXK2 581 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 CACTIN-AS1Q8N1I8 211 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 KRT78Q8N1N4 520 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 VWA5B2Q8N398 1253 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 SLC7A6Q92536 515 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 FGF11Q92914 225 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 DEPDC7Q96QD5 511 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 ZCCHC2Q9C0B9 1178 aaKnown RBP18.09■□□□□ 0.49
SDCBP-204ENST00000447182 SIRT3Q9NTG7 399 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-204ENST00000447182 TVP23BQ9NYZ1 205 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 A4GNTQ9UNA3 340 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 KLHL20Q9Y2M5 609 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 PLXND1Q9Y4D7 1925 aa18.09■□□□□ 0.49
SDCBP-204ENST00000447182 CCDC182A6NF36 153 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 TLX2O43763 284 aaPredicted RBP18.08■□□□□ 0.49
SDCBP-204ENST00000447182 PRKYO43930 277 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 B4GALT2O60909 372 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 TBX6O95947 436 aaPredicted RBP18.08■□□□□ 0.49
SDCBP-204ENST00000447182 PCBP4P57723 403 aaKnown RBP18.08■□□□□ 0.49
SDCBP-204ENST00000447182 MXD1Q05195 221 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 HNRNPA0Q13151 305 aaKnown RBP18.08■□□□□ 0.49
SDCBP-204ENST00000447182 TRIM60Q495X7 471 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 C3orf38Q5JPI3 329 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 PRAMEF14Q5SWL7 426 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 SLC35F1Q5T1Q4 408 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 PRAMEF13Q5VWM6 474 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 LINC00471Q8N535 108 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 RAB8BQ92930 207 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 TM4SF18Q96CE8 201 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 DTD2Q96FN9 168 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 RNF170Q96K19 258 aa18.08■□□□□ 0.49
SDCBP-204ENST00000447182 MRPS18AQ9NVS2 196 aaKnown RBP18.08■□□□□ 0.49
SDCBP-204ENST00000447182 A0A1W2PQL4 384 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-204ENST00000447182 FABP12A6NFH5 140 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 A6NL46 340 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ANHXE9PGG2 379 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 SOD1P00441 154 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ALPPP05187 535 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 TNNI3P19429 210 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ACADLP28330 430 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ETV5P41161 510 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ETV1P50549 477 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 MAPK12P53778 367 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 TAB1Q15750 504 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 PLK5Q496M5 336 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 DDI2Q5TDH0 399 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 CELF5Q8N6W0 485 aaKnown RBP18.08■□□□□ 0.48
SDCBP-204ENST00000447182 SMPDL3AQ92484 453 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF764Q96H86 408 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-204ENST00000447182 LINC00615Q96LM1 132 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-204ENST00000447182 WFDC6Q9BQY6 131 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 MMP28Q9H239 520 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 RHBGQ9H310 441 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ISYNA1Q9NPH2 558 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 ZSCAN32Q9NX65 697 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 SEC14L3Q9UDX4 400 aa18.08■□□□□ 0.48
SDCBP-204ENST00000447182 C17orf113A0A1B0GUU1 675 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 NME6O75414 186 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 ACADMP11310 421 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 SYN1P17600 705 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 NNMTP40261 264 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 GRIN2CQ14957 1233 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 FLYWCH1Q4VC44 716 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 KLHL22Q53GT1 634 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 KHDRBS2Q5VWX1 349 aaKnown RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 TRAPPC5Q8IUR0 188 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 CYB5D2Q8WUJ1 264 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 DIRAS2Q96HU8 199 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 DMRTB1Q96MA1 342 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 COQ10AQ96MF6 247 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 KCTD7Q96MP8 289 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF582Q96NG8 517 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 NDEL1Q9GZM8 345 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 C11orf54Q9H0W9 315 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 DPEP2Q9H4A9 486 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 MVB12BQ9H7P6 319 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 SPHK2Q9NRA0 654 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 KIAA1549LQ6ZVL6 1849 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 A8MV72 311 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 B4DXG7 233 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 TFECO14948 347 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms