RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 PRAMEF33A0A0G2JMD5 474 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 GGT3PA6NGU5 568 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 SLC33A1O00400 549 aaPredicted RBP10.74□□□□□ -0.69
FN1-211ENST00000443816 PRAMEF10O60809 474 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 CLPXO76031 633 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 H6PDO95479 791 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 AFF3P51826 1226 aaKnown RBP10.74□□□□□ -0.69
FN1-211ENST00000443816 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 IL17RCQ8NAC3 791 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 SPTSSAQ969W0 71 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 HSH2DQ96JZ2 352 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 SLC39A1Q9NY26 324 aa10.74□□□□□ -0.69
FN1-211ENST00000443816 SLC6A8P48029 635 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 ACTA2P62736 377 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 ACTG2P63267 376 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 HSF5Q4G112 596 aaPredicted RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PGAM5Q96HS1 289 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TTYH2Q9BSA4 534 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 NANSQ9NR45 359 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PAPPA2Q9BXP8 1791 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TLX2O43763 284 aaPredicted RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 PRKD3O94806 890 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 SRCP12931 536 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 P2RY2P41231 377 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TUBA3CQ13748 450 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 HNRNPA1L2Q32P51 320 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 SCGB2B2Q4G0G5 96 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 ZNF613Q6PF04 617 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 BEND4Q6ZU67 534 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 MFSD6LQ8IWD5 586 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 CEP76Q8TAP6 659 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TANKQ92844 425 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 GPR160Q9UJ42 338 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PTRH2Q9Y3E5 179 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 CDH10Q9Y6N8 788 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 C2orf92A0A1B0GVN3 265 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 A6NL46 340 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 SLC22A1O15245 554 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 GLDCP23378 1020 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 NTHL1P78549 312 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 GRHL2Q6ISB3 625 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PGM2L1Q6PCE3 622 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 FRS2Q8WU20 508 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 MCTS1Q9ULC4 181 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 CNMDO75829 334 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 CPXM2Q8N436 756 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 OR8J3Q8NGG0 315 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 C10orf82Q8WW14 230 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 HTRA1Q92743 480 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PCDHAC1Q9H158 963 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 IGKV6-21A0A0C4DH24 114 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 FOXO6A8MYZ6 492 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 KCNK5O95279 499 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PRKCAP17252 672 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PROZP22891 400 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 EIF5AL1Q6IS14 154 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 PACRGLQ8N7B6 248 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 STON2Q8WXE9 905 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 YTHDF1Q9BYJ9 559 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 EXOSC1Q9Y3B2 195 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 ASCC3Q8N3C0 2202 aaKnown RBP10.73□□□□□ -0.69
FN1-211ENST00000443816 PEPDP12955 493 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 NIPAL4Q0D2K0 466 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 ATG9BQ674R7 924 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 NAT14Q8WUY8 206 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 PELI2Q9HAT8 420 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 ERVK-18Q9QC07 812 aa10.73□□□□□ -0.69
FN1-211ENST00000443816 UBL4AP11441 157 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 CD36P16671 472 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 RIDAP52758 137 aaKnown RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 TDGQ13569 410 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 LACTB2Q53H82 288 aaPredicted RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 CARM1Q86X55 608 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 NLGN4XQ8N0W4 816 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 TRPV4Q9HBA0 871 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 PAK1IP1Q9NWT1 392 aaPredicted RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 RDH8Q9NYR8 311 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 PTGESO14684 152 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 PHYHO14832 338 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 BCAT2O15382 392 aaPredicted RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 ATE1O95260 518 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 PSKH1P11801 424 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 BCKDHAP12694 445 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 CD46P15529 392 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 EN2P19622 333 aaPredicted RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 CFL1P23528 166 aaKnown RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 MSX1P28360 303 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 TGFBR3Q03167 851 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 TUBB3Q13509 450 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 KIAA1614Q5VZ46 1190 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 ZC3H3Q8IXZ2 948 aaKnown RBP10.72□□□□□ -0.69
FN1-211ENST00000443816 OR52P1PQ8NH57 321 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
FN1-211ENST00000443816 OAZ3Q9UMX2 235 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms