RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HNRNPH2P55795 449 aaKnown RBP10.87□□□□□ -0.67
TTC28-203ENST00000442232 RPP38P78345 283 aaKnown RBP10.87□□□□□ -0.67
TTC28-203ENST00000442232 SLC7A5Q01650 507 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 IFT88Q13099 833 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 CUL3Q13618 768 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 PRAMEF20Q5VT98 475 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 PAGE2Q7Z2X7 111 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 CCDC71Q8IV32 467 aaPredicted RBP10.87□□□□□ -0.67
TTC28-203ENST00000442232 CLYBLQ8N0X4 340 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 FBXW8Q8N3Y1 598 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 JSRP1Q96MG2 331 aaPredicted RBP10.87□□□□□ -0.67
TTC28-203ENST00000442232 WWTR1Q9GZV5 400 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 TSPYL1Q9H0U9 437 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 AHSPQ9NZD4 102 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 PDZD2O15018 2839 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 CCDC168Q8NDH2 2452 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 A0A0A6YYD5 115 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 TRGV5A0A0B4J1U4 118 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 A0A1B0GVC2 190 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 GLOD5A6NK44 160 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 FOXE1O00358 373 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 EEDO75530 441 aaKnown RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 PRKRAO75569 313 aaKnown RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 SEMA3DO95025 777 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 AIFM1O95831 613 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 HOXD4P09016 255 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 GABRA1P14867 456 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 KRT15P19012 456 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 PIK3R1P27986 724 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 MSX1P28360 303 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 GALNSP34059 522 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 PIGAP37287 484 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 NRG3P56975 720 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 GUCY2DQ02846 1103 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 TRADDQ15628 312 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 ZNF791Q3KP31 576 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 EMC4Q5J8M3 183 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 C10orf62Q5T681 223 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 C1orf185Q5T7R7 199 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 GALNT12Q8IXK2 581 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 RPRMLQ8N4K4 120 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 PTGR2Q8N8N7 351 aaPredicted RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 L3MBTL4Q8NA19 623 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 PAQR8Q8TEZ7 354 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 ZNF597Q96LX8 424 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 ZNF559Q9BR84 538 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 DOHHQ9BU89 302 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 ACSS3Q9H6R3 686 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 DDX31Q9H8H2 851 aaKnown RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 QPCTLQ9NXS2 382 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 PSD3Q9NYI0 1048 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 RNF11Q9Y3C5 154 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
TTC28-203ENST00000442232 POLQO75417 2590 aa10.86□□□□□ -0.67
TTC28-203ENST00000442232 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
TTC28-203ENST00000442232 NINQ8N4C6 2090 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 C2orf92A0A1B0GVN3 265 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 LRRC14BA6NHZ5 514 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 HRKO00198 91 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 TMPRSS11DO60235 418 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 KLK8O60259 260 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 ZNF354AO60765 605 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 GUCY1B2O75343 617 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 KRT38O76015 456 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 SIX3O95343 332 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 NADKO95544 446 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 ALDOAP04075 364 aaKnown RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 SLC35E2P0CK97 266 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 GDF1P27539 372 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 BSGP35613 385 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 ZFP36L2P47974 494 aaKnown RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 SERPINB9P50453 376 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 SLC37A1P57057 533 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 FOXO1Q12778 655 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 MYBPHQ13203 477 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 EBPQ15125 230 aaKnown RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 TECRLQ5HYJ1 363 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 TBCELQ5QJ74 424 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 CES4AQ5XG92 561 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 FRG2Q64ET8 278 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 MRM1Q6IN84 353 aaKnown RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 TMEM200AQ86VY9 491 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 C17orf53Q8N3J3 647 aaPredicted RBP10.85□□□□□ -0.67
TTC28-203ENST00000442232 OR10G3Q8NGC4 313 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 WDR20Q8TBZ3 569 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 DOK4Q8TEW6 326 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 DIO2Q92813 273 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 PHF21BQ96EK2 531 aa10.85□□□□□ -0.67
TTC28-203ENST00000442232 LRRC46Q96FV0 321 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms