RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PNPLA2Q96AD5 504 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 DCTN5Q9BTE1 182 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 ABCG4Q9H172 646 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 PNNQ9H307 717 aaKnown RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 PRMT8Q9NR22 394 aaPredicted RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 MRPS2Q9Y399 296 aaKnown RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 FER1L5A0AVI2 2057 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 RNF212BA8MTL3 300 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 VEGFDO43915 354 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 OLFM2O95897 454 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 HLA-DPA1P20036 260 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 CALML3P27482 149 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 TKTL1P51854 596 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 SLC12A3P55017 1021 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 CYLC2Q14093 348 aaPredicted RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 EXOSC7Q15024 291 aaKnown RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 PCK2Q16822 640 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 VWA2Q5GFL6 755 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 NKAIN2Q5VXU1 208 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 LIPJQ5W064 366 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 REP15Q6BDI9 236 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF774Q6NX45 483 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 CDC42EP5Q6NZY7 148 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 RTL3Q8N8U3 475 aaKnown RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 BEST4Q8NFU0 473 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 OR4F5Q8NH21 305 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 ATP6V0A1Q93050 837 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 RAB39BQ96DA2 213 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 COG3Q96JB2 828 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF560Q96MR9 790 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 GPR137Q96N19 417 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 PRAM1Q96QH2 718 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 JPH2Q9BR39 696 aaPredicted RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 RSPH9Q9H1X1 276 aaPredicted RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 KCNMB3Q9NPA1 279 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 CYP39A1Q9NYL5 469 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 HMG20BQ9P0W2 317 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 VPS54Q9P1Q0 977 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 TDRKHQ9Y2W6 561 aaKnown RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 COL2A1P02458 1487 aaPredicted RBP3.85□□□□□ -1.79
PFDN4-202ENST00000441080 FGD5Q6ZNL6 1462 aa3.85□□□□□ -1.79
PFDN4-202ENST00000441080 TRIM49BA6NDI0 452 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 FOXI3A8MTJ6 420 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TLR4O00206 839 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 CHEK1O14757 476 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TSPAN2O60636 221 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 HSF2BPO75031 334 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 REC8O95072 547 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PDGFBP01127 241 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 FCER2P06734 321 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 FCGR3AP08637 254 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ABHD2P08910 425 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 FCARP24071 287 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 MATKP42679 507 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ACADSBP45954 432 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PITPNBP48739 271 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PPP1R8Q12972 351 aaKnown RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 CBX3Q13185 183 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PPP2R5CQ13362 524 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 GPAT3Q53EU6 434 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 EIPR1Q53HC9 387 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 UNC50Q53HI1 259 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PRAMEF7Q5VXH5 474 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 WDR25Q64LD2 544 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 SPINK14Q6IE38 97 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 STEAP1BQ6NZ63 245 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 PEX5LQ8IYB4 626 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 SLC39A11Q8N1S5 342 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 FGFRL1Q8N441 504 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 RDH11Q8TC12 318 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 KIAA1524Q8TCG1 905 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ITLN1Q8WWA0 313 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 SLCO4A1Q96BD0 722 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 DTD2Q96FN9 168 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ATP6V0BQ99437 205 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 NAP1L3Q99457 506 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ELL3Q9HB65 397 aaPredicted RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TAS2R16Q9NYV7 291 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 ERVK-18Q9QC07 812 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TRMT6Q9UJA5 497 aaKnown RBP3.84□□□□□ -1.79
PFDN4-202ENST00000441080 APPL1Q9UKG1 709 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TEX264Q9Y6I9 313 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 SMAD5-AS1Q9Y6J3 95 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 KIF7Q2M1P5 1343 aa3.84□□□□□ -1.79
PFDN4-202ENST00000441080 TRIM64A6NGJ6 449 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 TRIM64BA6NI03 449 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 CCDC69A6NI79 296 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 E9PAM4 449 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 GPRIN2O60269 458 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 BAG2O95816 211 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 MELTFP08582 738 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 BCL3P20749 454 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 PPP2R1BP30154 601 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 ELK3P41970 407 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 TNFRSF4P43489 277 aa3.83□□□□□ -1.8
PFDN4-202ENST00000441080 NT5C2P49902 561 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms